Resource

Id Histone_ChIP-seq/ENCSR123ASLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR123ASL [biosample_summary="Homo sapiens spleen tissue female adult (41 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR123ASL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (41 years)
  • date_created: 2020-05-01T03:06:22.558566+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR123ASL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR123ASL float

Histone_ChIP-seq_ENCSR123ASL
Histone_ChIP-seq ENCSR123ASL [biosample_summary="Homo sapiens spleen tissue female adult (41 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR123ASL [1.72, 8.53]
n
12,812,851
mean
4.25
sd
1.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 128128510.40% 13292
chr1 1114191 0.45% 1199
chr2 1021305 0.42% 986
chr3 484191 0.24% 526
chr4 559351 0.29% 558
chr5 732728 0.40% 753
chr6 817666 0.48% 860
chr7 719529 0.45% 655
chr8 550565 0.38% 560
chr9 577589 0.42% 572
chr10 677639 0.51% 662
chr11 577220 0.43% 595
chr12 586402 0.44% 593
chr13 316295 0.28% 293
chr14 386976 0.36% 396
chr15 418463 0.41% 437
chr16 418390 0.46% 420
chr17 747378 0.90% 730
chr18 210182 0.26% 236
chr19 703626 1.20% 754
chr20 459192 0.71% 488
chr21 114615 0.25% 109
chr22 250030 0.49% 290
chrX 369328 0.24% 620
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 13292 180 18493 963.95 670
global segment-length histogram

Files

Filename Size md5
ENCFF869PFA.bed.gz 239.78 KB 6645a6a239d9c2cfbbb6ae59d25de098
ENCFF869PFA.tabix.bed.gz 129.56 KB a5f9461d8c9db483a2d35e2145ac3ce1
ENCFF869PFA.tabix.bed.gz.tbi 66.69 KB 32a9ce9f8f5d11fd37a0b2ea931b70e1
genomic_resource.yaml 1.71 KB f6957f707efd0d2e805663f5a858b63b
statistics/