Resource

Id Histone_ChIP-seq/ENCSR122IWPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR122IWP [biosample_summary="Homo sapiens BLaER1 48 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR122IWP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 48 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:33.089740+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR122IWP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 48 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR122IWP float

Histone_ChIP-seq_ENCSR122IWP
Histone_ChIP-seq ENCSR122IWP [biosample_summary="Homo sapiens BLaER1 48 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR122IWP [1.25, 97.9]
n
63,668,558
mean
36.6
sd
30.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 636685581.98% 60280
chr1 6192593 2.49% 5691
chr1_KI270706v1_random 250 0.14% 1
chr1_KI270709v1_random 955 1.43% 2
chr1_KI270712v1_random 2984 1.70% 4
chr1_KI270713v1_random 2965 7.28% 7
chr2 4045259 1.67% 4054
chr3 3139519 1.58% 2921
chr3_GL000221v1_random 696 0.45% 1
chr4 2089688 1.10% 1930
chr4_GL000008v2_random 1471 0.70% 4
chr5 2825716 1.56% 2627
chr6 3116261 1.82% 2691
chr7 3038001 1.91% 2992
chr8 2603816 1.79% 2608
chr9 2643775 1.91% 2547
chr9_KI270717v1_random 586 1.46% 1
chr9_KI270719v1_random 1588 0.90% 4
chr10 2819801 2.11% 2760
chr11 3265186 2.42% 2880
chr12 3239487 2.43% 2970
chr13 1157707 1.01% 1099
chr14 1976644 1.85% 1816
chr14_GL000009v2_random 625 0.31% 1
chr14_GL000194v1_random 1830 0.96% 3
chr14_GL000225v1_random 1377 0.65% 4
chr14_KI270723v1_random 789 2.07% 2
chr14_KI270724v1_random 757 1.91% 2
chr14_KI270725v1_random 786 0.45% 1
chr15 2071141 2.03% 1985
chr16 2993271 3.31% 2859
chr16_KI270728v1_random 2085 0.11% 6
chr17 4218936 5.07% 3851
chr17_GL000205v2_random 11034 5.95% 7
chr17_KI270729v1_random 6672 2.38% 11
chr17_KI270730v1_random 1123 1.00% 4
chr18 973381 1.21% 961
chr19 5111138 8.72% 5085
chr20 1878334 2.91% 1877
chr21 830861 1.78% 841
chr22 1705101 3.36% 1683
chr22_KI270731v1_random 322 0.21% 1
chr22_KI270732v1_random 649 1.56% 1
chr22_KI270733v1_random 7512 4.18% 15
chr22_KI270735v1_random 252 0.59% 1
chr22_KI270736v1_random 2407 1.32% 8
chr22_KI270737v1_random 275 0.26% 1
chrUn_GL000195v1 4638 2.54% 6
chrUn_GL000214v1 533 0.39% 2
chrUn_GL000216v2 4776 2.70% 13
chrUn_GL000219v1 5316 2.97% 3
chrUn_GL000220v1 1858 1.15% 5
chrUn_KI270435v1 360 0.39% 1
chrUn_KI270438v1 5710 5.08% 7
chrUn_KI270442v1 5870 1.50% 14
chrUn_KI270589v1 523 1.18% 2
chrUn_KI270743v1 254 0.12% 1
chrUn_KI270744v1 588 0.35% 2
chrUn_KI270751v1 261 0.17% 1
chrUn_KI270754v1 789 1.96% 2
chrUn_KI270756v1 259 0.33% 1
chrX 1645901 1.05% 1387
chrY 5316 0.01% 13
3304 contigs with no values (121899262 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 60280 250 17819 1056.21 526
global segment-length histogram

Files

Filename Size md5
ENCFF168ZWV.bed.gz 1.32 MB afa2a9ad98346913f0dd8f6302171cb9
ENCFF168ZWV.tabix.bed.gz 628.9 KB 50b21d6eac4c92c2e8927b03618ee644
ENCFF168ZWV.tabix.bed.gz.tbi 217.17 KB d9edd171e16b2c9b98c7b6ddc6cfdc48
genomic_resource.yaml 3.12 KB f2a2650b2195de1d70a54a272f2c19f2
statistics/