Resource

Id Histone_ChIP-seq/ENCSR119XNKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR119XNK [biosample_summary="Homo sapiens right lobe of liver tissue female child (16 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR119XNK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001114/
  • biosample_summary: Homo sapiens right lobe of liver tissue female child (16 years)
  • date_created: 2022-05-11T01:54:30.856905+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR119XNK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female child (16 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR119XNK float

Histone_ChIP-seq_ENCSR119XNK
Histone_ChIP-seq ENCSR119XNK [biosample_summary="Homo sapiens right lobe of liver tissue female child (16 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR119XNK [1.79, 66.2]
n
92,457,994
mean
13.4
sd
9.23

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 924579942.87% 58936
chr1 9357464 3.76% 5845
chr2 6971303 2.88% 4542
chr3 5758062 2.90% 3644
chr4 4008395 2.11% 2588
chr5 4553547 2.51% 2846
chr6 5103329 2.99% 3371
chr7 4490231 2.82% 2884
chr8 3934489 2.71% 2542
chr9 4450437 3.22% 2683
chr10 4641406 3.47% 3027
chr11 4805923 3.56% 2977
chr12 4772703 3.58% 3003
chr13 2113090 1.85% 1335
chr14 2944509 2.75% 1848
chr15 3072929 3.01% 1914
chr16 3632616 4.02% 2293
chr17 4584273 5.51% 2868
chr18 1921974 2.39% 1240
chr19 3737148 6.38% 2384
chr20 2483677 3.85% 1601
chr21 979024 2.10% 649
chr22 2347841 4.62% 1397
chrX 1793624 1.15% 1455
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 58936 210 32842 1568.79 1075
global segment-length histogram

Files

Filename Size md5
ENCFF688VIT.bed.gz 1.48 MB 61ef5dbf833e365e64aa775fb803e332
ENCFF688VIT.tabix.bed.gz 656.91 KB ef1d3e660e3042cc8e703be2478b14a2
ENCFF688VIT.tabix.bed.gz.tbi 215.97 KB 2edd06e9466c4bfc89481371b75b019b
genomic_resource.yaml 1.53 KB 28cc3331e1aaf17f5d903eb557aa4fc9
statistics/