Resource

Id Histone_ChIP-seq/ENCSR114GLZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR114GLZ [biosample_summary="Homo sapiens SU-DHL-6" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR114GLZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002357/
  • biosample_summary: Homo sapiens SU-DHL-6
  • date_created: 2014-02-20T05:43:16.098620+00:00
  • date_released: 2014-07-11
  • doi: 10.17989/ENCSR114GLZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR114GLZ float

Histone_ChIP-seq_ENCSR114GLZ

Histone_ChIP-seq ENCSR114GLZ [biosample_summary="Homo sapiens SU-DHL-6" and target="H3K9ac"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR114GLZ [1.52, 55.2]
n
40,989,004
mean
15.2
sd
9.58

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 409890041.27% 31178
chr1 3912081 1.57% 3003
chr1_KI270713v1_random 562 1.38% 1
chr2 3089058 1.28% 2386
chr3 2680091 1.35% 2017
chr4 1542627 0.81% 1234
chr5 1982408 1.09% 1454
chr6 2527356 1.48% 1810
chr7 1986294 1.25% 1513
chr8 1640565 1.13% 1232
chr9 1643088 1.19% 1281
chr10 1721254 1.29% 1326
chr11 2023519 1.50% 1476
chr12 2131896 1.60% 1635
chr13 922259 0.81% 729
chr14 1523800 1.42% 1174
chr15 1309040 1.28% 984
chr16 1527216 1.69% 1157
chr17 2126825 2.55% 1570
chr17_GL000205v2_random 1189 0.64% 2
chr18 596517 0.74% 450
chr19 2319919 3.96% 1785
chr20 1133440 1.76% 903
chr21 436381 0.93% 351
chr22 908106 1.79% 672
chrUn_GL000219v1 964 0.54% 1
chrUn_KI270438v1 314 0.28% 1
chrX 1302235 0.83% 1031
3339 contigs with no values (185786461 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 31178 305 19880 1314.68 865
global segment-length histogram

Files

Filename Size md5
ENCFF205CIJ.bed.gz 648.65 KB 9186e3803bb23124ebb2ff210c5695d5
ENCFF205CIJ.tabix.bed.gz 355.5 KB bf29eda45d621d3d02fd2f7c92938af7
ENCFF205CIJ.tabix.bed.gz.tbi 139.1 KB 52e9fc64925b777b14a9433b91b76abc
genomic_resource.yaml 1.35 KB 181b482539d581ecb7ed51a1770e4637
statistics/