Resource

Id Histone_ChIP-seq/ENCSR111RZNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR111RZN [biosample_summary="Homo sapiens endocrine pancreas tissue adult (59 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR111RZN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000016/
  • biosample_summary: Homo sapiens endocrine pancreas tissue adult (59 years)
  • date_created: 2015-09-15T20:27:26.495227+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR111RZN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR111RZN float

Histone_ChIP-seq_ENCSR111RZN
Histone_ChIP-seq ENCSR111RZN [biosample_summary="Homo sapiens endocrine pancreas tissue adult (59 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR111RZN [2.45, 6.4]
n
2,304,530
mean
3.29
sd
0.569

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 23045300.07% 14061
chr1 175947 0.07% 1101
chr2 203544 0.08% 1266
chr3 114658 0.06% 711
chr4 110365 0.06% 680
chr5 135595 0.07% 807
chr6 90755 0.05% 572
chr7 95136 0.06% 586
chr8 116347 0.08% 687
chr9 69499 0.05% 421
chr10 126298 0.09% 770
chr11 116982 0.09% 734
chr12 127358 0.10% 766
chr13 70817 0.06% 450
chr14 74140 0.07% 455
chr15 65296 0.06% 391
chr16 81599 0.09% 505
chr17 45013 0.05% 279
chr18 63303 0.08% 392
chr19 133427 0.23% 723
chr20 50060 0.08% 313
chr21 21622 0.05% 136
chr22 14442 0.03% 90
chrX 202327 0.13% 1226
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 14061 135 763 163.9 135
global segment-length histogram

Files

Filename Size md5
ENCFF793MNL.bed.gz 203.85 KB 5e07fd0927ea0bcb3b7d449c61199d03
ENCFF793MNL.tabix.bed.gz 115.74 KB 784ceea0d91f78b0143c3196b5d03a10
ENCFF793MNL.tabix.bed.gz.tbi 111.3 KB 44adbe695ee0c0a5e315b8d9639de4d4
genomic_resource.yaml 1.5 KB b7c7967959d81dd3b046ffae0bf3d9e4
statistics/