Resource

Id Histone_ChIP-seq/ENCSR105VFRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR105VFR [biosample_summary="Homo sapiens heart left ventricle tissue male adult (55 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR105VFR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (55 years)
  • date_created: 2021-08-25T18:07:52.641626+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR105VFR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (55 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR105VFR float

Histone_ChIP-seq_ENCSR105VFR
Histone_ChIP-seq ENCSR105VFR [biosample_summary="Homo sapiens heart left ventricle tissue male adult (55 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR105VFR [1.65, 63.3]
n
98,159,621
mean
12
sd
9.08

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 981596213.05% 94884
chr1 9688311 3.89% 8930
chr2 7612775 3.14% 7507
chr3 6988217 3.52% 6528
chr4 4353274 2.29% 4281
chr5 5374453 2.96% 5223
chr6 5489564 3.21% 5501
chr7 4286172 2.69% 4305
chr8 4124823 2.84% 4227
chr9 4139378 2.99% 4049
chr10 5509972 4.12% 5219
chr11 4901171 3.63% 4776
chr12 5260606 3.95% 4792
chr13 2463908 2.15% 2469
chr14 3077152 2.87% 3011
chr15 3596297 3.53% 3510
chr16 3055903 3.38% 3017
chr17 4774357 5.73% 4337
chr18 2149326 2.67% 2167
chr19 3419030 5.83% 3165
chr20 2609336 4.05% 2459
chr21 1035435 2.22% 1077
chr22 2298025 4.52% 2043
chrX 1884247 1.21% 2212
chrY 67889 0.12% 79
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 94884 180 27104 1034.52 616
global segment-length histogram

Files

Filename Size md5
ENCFF055NHF.bed.gz 2.17 MB 63847c5d8a58188f5b88d6e06398c617
ENCFF055NHF.tabix.bed.gz 1008.17 KB cb594e8c7adb82d83a75c55c10e11247
ENCFF055NHF.tabix.bed.gz.tbi 272.82 KB cbb29a4503cbc0857108c9c8ef547e84
genomic_resource.yaml 1.53 KB bcd5f58d666be7ebfdd626cee48a03fc
statistics/