Resource

Id Histone_ChIP-seq/ENCSR105FGGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR105FGG [biosample_summary="Homo sapiens BLaER1 36 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR105FGG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 36 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:32.340412+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR105FGG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 36 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR105FGG float

Histone_ChIP-seq_ENCSR105FGG
Histone_ChIP-seq ENCSR105FGG [biosample_summary="Homo sapiens BLaER1 36 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR105FGG [1.72, 96.3]
n
56,207,687
mean
36.9
sd
25.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 562076871.75% 34289
chr1 5363775 2.15% 3258
chr2 3604517 1.49% 2245
chr3 2851363 1.44% 1721
chr4 1957011 1.03% 1171
chr5 2559555 1.41% 1478
chr6 2934981 1.72% 1686
chr7 2627166 1.65% 1648
chr8 2211169 1.52% 1442
chr9 2225694 1.61% 1376
chr10 2450841 1.83% 1510
chr11 2931927 2.17% 1702
chr12 2989969 2.24% 1776
chr13 1133584 0.99% 697
chr14 1780982 1.66% 1068
chr15 1789767 1.75% 1103
chr16 2550849 2.82% 1562
chr17 3572532 4.29% 2095
chr18 905557 1.13% 572
chr19 4615869 7.87% 2996
chr20 1616430 2.51% 1016
chr21 605725 1.30% 427
chr22 1402997 2.76% 847
chrX 1525427 0.98% 893
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 34289 213 17330 1639.23 1150
global segment-length histogram

Files

Filename Size md5
ENCFF284IBJ.bed.gz 942.08 KB 5cb0b67113f1c11f896bb7205808e5cc
ENCFF284IBJ.tabix.bed.gz 398.28 KB da1098830c4c8157f7afbefa250fd9d7
ENCFF284IBJ.tabix.bed.gz.tbi 170.8 KB 1245e75097a1eafa9ab39cd3526b200c
genomic_resource.yaml 2.31 KB a86ecbea9375e528f2adf145c1cfac3e
statistics/