Resource

Id Histone_ChIP-seq/ENCSR104CCBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR104CCB [biosample_summary="Homo sapiens sigmoid colon tissue female adult (51 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR104CCB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue female adult (51 years)
  • date_created: 2018-11-07T17:35:45.383249+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR104CCB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR104CCB float

Histone_ChIP-seq_ENCSR104CCB
Histone_ChIP-seq ENCSR104CCB [biosample_summary="Homo sapiens sigmoid colon tissue female adult (51 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR104CCB [1.5, 6.93]
n
8,686,057
mean
3.69
sd
0.867

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 86860570.27% 10232
chr1 787130 0.32% 901
chr2 609438 0.25% 618
chr3 319318 0.16% 354
chr4 308451 0.16% 358
chr5 416170 0.23% 466
chr6 493709 0.29% 577
chr7 431651 0.27% 492
chr8 323577 0.22% 366
chr9 404300 0.29% 432
chr10 405739 0.30% 440
chr11 396582 0.29% 461
chr12 411498 0.31% 496
chr13 213523 0.19% 236
chr14 274331 0.26% 307
chr15 235916 0.23% 263
chr16 348516 0.39% 450
chr17 589598 0.71% 660
chr18 117987 0.15% 135
chr19 705971 1.20% 830
chr20 334473 0.52% 412
chr21 75946 0.16% 95
chr22 195024 0.38% 277
chrX 287209 0.18% 606
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 10232 170 9596 848.91 590
global segment-length histogram

Files

Filename Size md5
ENCFF524VIK.bed.gz 200.12 KB 9e05a510ae1e8da31c67ae0a6cd80e43
ENCFF524VIK.tabix.bed.gz 103.83 KB c920439e358fe1ff5407df77b0ea8c42
ENCFF524VIK.tabix.bed.gz.tbi 51.27 KB 08732af7b8d84cb24a41385de0ebb956
genomic_resource.yaml 1.73 KB 105922a34b85c44aa1d56a019304b05f
statistics/