Resource

Id Histone_ChIP-seq/ENCSR101KMFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR101KMF [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (51 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR101KMF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue female adult (51 years)
  • date_created: 2017-12-06T21:15:03.011152+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR101KMF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR101KMF float

Histone_ChIP-seq_ENCSR101KMF
Histone_ChIP-seq ENCSR101KMF [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (51 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR101KMF [1.53, 8.77]
n
18,913,686
mean
3.46
sd
0.987

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 189136860.59% 24059
chr1 1090030 0.44% 1481
chr2 1114708 0.46% 1648
chr3 922417 0.47% 1307
chr4 989429 0.52% 1349
chr5 1147653 0.63% 1460
chr6 775534 0.45% 1158
chr7 1073910 0.67% 1412
chr8 819749 0.56% 1172
chr9 651521 0.47% 825
chr10 695180 0.52% 921
chr11 685852 0.51% 967
chr12 1016248 0.76% 1156
chr13 472821 0.41% 760
chr14 452692 0.42% 669
chr15 502660 0.49% 624
chr16 480795 0.53% 582
chr17 371016 0.45% 463
chr18 331361 0.41% 485
chr19 3364597 5.74% 2726
chr20 265852 0.41% 382
chr21 357583 0.77% 511
chr22 264661 0.52% 374
chrX 1067417 0.68% 1627
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 24059 190 41940 786.14 594
global segment-length histogram

Files

Filename Size md5
ENCFF854FHY.bed.gz 474.5 KB 69fdf38f8f2412fdc0b74bd0d4e63fe5
ENCFF854FHY.tabix.bed.gz 244.55 KB 2ef820a6b07b87fa6a129afa78e087b7
ENCFF854FHY.tabix.bed.gz.tbi 140.68 KB 503fe309f208a23094db56f4bafb0eea
genomic_resource.yaml 1.78 KB 7be7570bae70af2a4588911f9f44be2a
statistics/