Resource

Id Histone_ChIP-seq/ENCSR101EEJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR101EEJ [biosample_summary="Homo sapiens transverse colon tissue male adult (54 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR101EEJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001157/
  • biosample_summary: Homo sapiens transverse colon tissue male adult (54 years)
  • date_created: 2017-07-28T10:10:23.065791+00:00
  • date_released: 2017-08-28
  • doi: 10.17989/ENCSR101EEJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR101EEJ float

Histone_ChIP-seq_ENCSR101EEJ
Histone_ChIP-seq ENCSR101EEJ [biosample_summary="Homo sapiens transverse colon tissue male adult (54 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR101EEJ [1.44, 7.4]
n
59,926,862
mean
2.87
sd
0.621

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 599268621.86% 56909
chr1 6301995 2.53% 5888
chr2 4654631 1.92% 4680
chr3 3676411 1.85% 3672
chr4 2420941 1.27% 2571
chr5 3187887 1.76% 3116
chr6 2569330 1.50% 2644
chr7 2608910 1.64% 2589
chr8 1976418 1.36% 2041
chr9 2527469 1.83% 2391
chr10 2617709 1.96% 2543
chr11 2988091 2.21% 2727
chr12 3600665 2.70% 3273
chr13 1127704 0.99% 1223
chr14 2398248 2.24% 2206
chr15 2424704 2.38% 2373
chr16 2570155 2.85% 2227
chr17 3459047 4.15% 3034
chr18 948337 1.18% 999
chr19 4020211 6.86% 3053
chr20 1629967 2.53% 1553
chr21 699835 1.50% 716
chr22 1384131 2.72% 1213
chrX 127769 0.08% 168
chrY 6297 0.01% 9
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 56909 193 18470 1053.03 771
global segment-length histogram

Files

Filename Size md5
ENCFF129VAT.bed.gz 1.29 MB cc1a36f646a4e32b0766212c195bb083
ENCFF129VAT.tabix.bed.gz 608.54 KB 30f2cf77149b99cc4f56d9e26ca8a1ec
ENCFF129VAT.tabix.bed.gz.tbi 123.09 KB d96568a526f5b3f04008a2ad3ffa6822
genomic_resource.yaml 1.73 KB 5ec1118efc50a1907283d2bf3a4cdcbd
statistics/