Resource

Id Histone_ChIP-seq/ENCSR094VCEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR094VCE [biosample_summary="Homo sapiens MM.1S" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR094VCE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005724/
  • biosample_summary: Homo sapiens MM.1S
  • date_created: 2014-10-24T16:22:15.091183+00:00
  • date_released: 2016-05-06
  • doi: 10.17989/ENCSR094VCE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR094VCE float

Histone_ChIP-seq_ENCSR094VCE
Histone_ChIP-seq ENCSR094VCE [biosample_summary="Homo sapiens MM.1S" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR094VCE [1.46, 13.7]
n
78,532,754
mean
4.1
sd
1.42

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 785327542.44% 89302
chr1 7742147 3.11% 8463
chr2 7086849 2.93% 7809
chr3 5964354 3.01% 6563
chr4 4358727 2.29% 5018
chr5 4958935 2.73% 5598
chr6 4872596 2.85% 5573
chr7 4338669 2.72% 4919
chr8 3451185 2.38% 3937
chr9 3039800 2.20% 3535
chr10 3759541 2.81% 4207
chr11 4227244 3.13% 4720
chr12 3962848 2.97% 4588
chr13 1299372 1.14% 1667
chr14 1318618 1.23% 1690
chr15 2964359 2.91% 3219
chr16 1846642 2.04% 2229
chr17 3229042 3.88% 3736
chr18 1709959 2.13% 1986
chr19 1585434 2.70% 2155
chr20 2430716 3.77% 2619
chr21 950750 2.04% 1051
chr22 1539539 3.03% 1688
chrX 1895428 1.21% 2332
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 89302 188 12244 879.41 686
global segment-length histogram

Files

Filename Size md5
ENCFF245RVO.bed.gz 2.16 MB b57b5f291f4f276619ca85deb7f14c69
ENCFF245RVO.tabix.bed.gz 961.52 KB 40fd599bbc4c2367373fb5b310aada6c
ENCFF245RVO.tabix.bed.gz.tbi 294.88 KB c7a5309fe872a7d5339c96d714794716
genomic_resource.yaml 1.59 KB 2ac18b4fcc9fda6e67058b02e03eac9f
statistics/