Resource

Id Histone_ChIP-seq/ENCSR086YIHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR086YIH [biosample_summary="Homo sapiens MM.1S" and target="H3K4me2"]
Description
Labels
  • accession: ENCSR086YIH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005724/
  • biosample_summary: Homo sapiens MM.1S
  • date_created: 2014-02-20T04:37:45.680945+00:00
  • date_released: 2016-06-30
  • doi: 10.17989/ENCSR086YIH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR086YIH float

Histone_ChIP-seq_ENCSR086YIH
Histone_ChIP-seq ENCSR086YIH [biosample_summary="Homo sapiens MM.1S" and target="H3K4me2"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR086YIH [1.44, 24.3]
n
84,339,118
mean
7.8
sd
3.27

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 843391182.62% 71860
chr1 8080365 3.25% 6729
chr2 6857652 2.83% 5711
chr3 5713028 2.88% 4763
chr4 4234119 2.23% 3683
chr5 4852606 2.67% 4007
chr6 5308978 3.11% 4367
chr7 4371521 2.74% 3833
chr8 3506675 2.42% 3062
chr9 3274937 2.37% 2826
chr10 3778723 2.82% 3185
chr11 4389689 3.25% 3669
chr12 4362361 3.27% 3667
chr13 1706263 1.49% 1555
chr14 2081437 1.94% 1944
chr15 2909611 2.85% 2415
chr16 2571174 2.85% 2286
chr17 3945501 4.74% 3243
chr18 1739505 2.16% 1531
chr19 2974190 5.07% 2641
chr20 2376671 3.69% 2025
chr21 1024173 2.19% 844
chr22 1681085 3.31% 1407
chrX 2597673 1.66% 2465
chrY 1181 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 71860 217 23536 1173.66 949
global segment-length histogram

Files

Filename Size md5
ENCFF613LHD.bed.gz 1.86 MB e9f21d3355d35c77bc7d246b393ea486
ENCFF613LHD.tabix.bed.gz 804.33 KB 22d333069c1c2473142cc53da3348224
ENCFF613LHD.tabix.bed.gz.tbi 308.3 KB bc95baabfa9345e999cf4d89f53f2b11
genomic_resource.yaml 1.86 KB ab0e4a7942fa439322df6c1e2242d635
statistics/