Resource

Id Histone_ChIP-seq/ENCSR086JMAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR086JMA [biosample_summary="Homo sapiens heart right ventricle tissue male child (3 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR086JMA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male child (3 years)
  • date_created: 2015-10-01T07:17:30.746702+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR086JMA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male child (3 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR086JMA float

Histone_ChIP-seq_ENCSR086JMA
Histone_ChIP-seq ENCSR086JMA [biosample_summary="Homo sapiens heart right ventricle tissue male child (3 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR086JMA [1.55, 15]
n
8,674,543
mean
4.55
sd
1.17

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 86745430.27% 25241
chr1 532935 0.21% 1641
chr2 648700 0.27% 2025
chr3 522738 0.26% 1622
chr4 581567 0.31% 1754
chr5 570873 0.31% 1708
chr6 441992 0.26% 1380
chr7 483511 0.30% 1413
chr8 595780 0.41% 1731
chr9 353259 0.26% 994
chr10 379979 0.28% 1116
chr11 413727 0.31% 1211
chr12 543982 0.41% 1524
chr13 258149 0.23% 831
chr14 256159 0.24% 818
chr15 223261 0.22% 666
chr16 279977 0.31% 800
chr17 175830 0.21% 508
chr18 195489 0.24% 611
chr19 787909 1.34% 1617
chr20 173245 0.27% 545
chr21 149686 0.32% 418
chr22 67831 0.13% 200
chrX 28757 0.02% 83
chrY 9207 0.02% 25
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 25241 140 4108 343.67 291
global segment-length histogram

Files

Filename Size md5
ENCFF894QYW.bed.gz 446.16 KB 5931b28ac37b3af8fa6334e23acfea21
ENCFF894QYW.tabix.bed.gz 233.27 KB c77a27c064faeb641865af9b4fe8861e
ENCFF894QYW.tabix.bed.gz.tbi 156.28 KB f40fb1bf38dbde68cea85f37f43dd72c
genomic_resource.yaml 1.74 KB a1bddaa2834dd45f06657781480946f9
statistics/