Resource

Id Histone_ChIP-seq/ENCSR086FIZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR086FIZ [biosample_summary="Homo sapiens parathyroid adenoma tissue male adult (65 years)" and target="H3K79me2"]
Description
Labels
  • accession: ENCSR086FIZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_NTR_0001226/
  • biosample_summary: Homo sapiens parathyroid adenoma tissue male adult (65 years)
  • date_created: 2017-09-13T18:33:51.171999+00:00
  • date_released: 2017-12-01
  • doi: 10.17989/ENCSR086FIZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (65 years)
  • status: released
  • submitter_comment: Read – level (FASTQ and BAM files) data will be shared with collaborating investigators who are funded by the NHGRI ENCODE project. The data will be made available using a password protected system maintained by the ENCODE data coordination center at Stanford University (https://www.encodeproject.org/), and will be clearly identified as protected human subject data. The read level data will never be released to the general scientific community nor to the general public.
  • target: H3K79me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR086FIZ float

Histone_ChIP-seq_ENCSR086FIZ
Histone_ChIP-seq ENCSR086FIZ [biosample_summary="Homo sapiens parathyroid adenoma tissue male adult (65 years)" and target="H3K79me2"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR086FIZ [1.69, 9.45]
n
59,572,800
mean
3.78
sd
1.04

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 595728001.85% 90075
chr1 2517789 1.01% 4616
chr2 5605292 2.31% 8371
chr3 4915833 2.48% 7470
chr4 1080708 0.57% 2022
chr5 4069708 2.24% 5965
chr6 3639998 2.13% 5692
chr7 3842852 2.41% 5787
chr8 2839122 1.96% 4361
chr9 1222758 0.88% 2112
chr10 4120197 3.08% 5985
chr11 1397760 1.03% 2516
chr12 4037633 3.03% 6049
chr13 554480 0.48% 1028
chr14 2747303 2.57% 4097
chr14_GL000194v1_random 689 0.36% 2
chr15 951915 0.93% 1782
chr16 3328655 3.68% 4547
chr17 3945001 4.74% 5364
chr18 1547395 1.93% 2340
chr19 3234216 5.52% 3908
chr20 2474569 3.84% 3392
chr21 247503 0.53% 443
chr22 744113 1.46% 1250
chrUn_GL000218v1 205 0.13% 1
chrUn_GL000219v1 578 0.32% 2
chrX 506528 0.32% 973
3340 contigs with no values (185772686 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 90075 205 15491 661.37 474
global segment-length histogram

Files

Filename Size md5
ENCFF942BYV.bed.gz 1.83 MB 615d3329908176536c9bfb7fe5c713a3
ENCFF942BYV.tabix.bed.gz 909.55 KB 30e8eec816f8749dc1624399f13d6b5c
ENCFF942BYV.tabix.bed.gz.tbi 148.07 KB 15e60e7ae9c7ebbd31fc0e4a7291353a
genomic_resource.yaml 2.04 KB 1461da35c29080e7c3be7b4420798310
statistics/