Resource

Id Histone_ChIP-seq/ENCSR083QREcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR083QRE [biosample_summary="Homo sapiens mucosa of stomach tissue male adult (59 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR083QRE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001199/
  • biosample_summary: Homo sapiens mucosa of stomach tissue male adult (59 years)
  • date_created: 2015-09-15T19:51:58.445593+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR083QRE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR083QRE float

Histone_ChIP-seq_ENCSR083QRE
Histone_ChIP-seq ENCSR083QRE [biosample_summary="Homo sapiens mucosa of stomach tissue male adult (59 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR083QRE [1.75, 8.99]
n
13,050,173
mean
3.95
sd
0.865

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 130501730.41% 19257
chr1 1384419 0.56% 2072
chr2 776297 0.32% 1198
chr3 731765 0.37% 1106
chr4 345539 0.18% 564
chr5 471702 0.26% 723
chr6 541712 0.32% 815
chr7 505363 0.32% 765
chr8 327121 0.23% 518
chr9 599921 0.43% 878
chr10 481569 0.36% 774
chr11 845671 0.63% 1178
chr12 747598 0.56% 1096
chr13 155991 0.14% 263
chr14 394239 0.37% 614
chr15 471584 0.46% 715
chr16 710490 0.79% 1043
chr17 1051646 1.26% 1473
chr18 137796 0.17% 231
chr19 1148572 1.96% 1491
chr20 468216 0.73% 684
chr21 185633 0.40% 282
chr22 524287 1.03% 704
chrX 42612 0.03% 69
chrY 430 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 19257 240 4992 677.68 583
global segment-length histogram

Files

Filename Size md5
ENCFF395NHZ.bed.gz 379.17 KB 3efcf806e108ac28a490bf3b1c5e2de5
ENCFF395NHZ.tabix.bed.gz 195.98 KB 2d4cc48659bbf9b1b304e411227bf511
ENCFF395NHZ.tabix.bed.gz.tbi 86.8 KB 3ed72587d8c97f5626178f509d52927c
genomic_resource.yaml 2.02 KB c209e335d14dbce495765a367000c326
statistics/