Resource

Id Histone_ChIP-seq/ENCSR083DXDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR083DXD [biosample_summary="Homo sapiens transverse colon tissue male adult (37 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR083DXD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001157/
  • biosample_summary: Homo sapiens transverse colon tissue male adult (37 years)
  • date_created: 2017-07-28T10:09:48.320584+00:00
  • date_released: 2017-08-28
  • doi: 10.17989/ENCSR083DXD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR083DXD float

Histone_ChIP-seq_ENCSR083DXD
Histone_ChIP-seq ENCSR083DXD [biosample_summary="Homo sapiens transverse colon tissue male adult (37 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR083DXD [1.06, 4.96]
n
84,124,787
mean
2.26
sd
0.495

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 841247872.61% 36155
chr1 4653010 1.87% 2192
chr2 5827985 2.41% 2837
chr3 5284224 2.66% 2497
chr4 5598491 2.94% 2600
chr5 7250699 3.99% 3086
chr6 4633187 2.71% 2222
chr7 6144768 3.86% 2523
chr8 5080863 3.50% 2208
chr9 2805760 2.03% 1303
chr10 3219906 2.41% 1420
chr11 4389579 3.25% 1879
chr12 4256781 3.19% 1702
chr13 3777186 3.30% 1859
chr14 2996262 2.80% 1440
chr15 2287555 2.24% 985
chr16 2398229 2.65% 984
chr17 1254531 1.51% 615
chr18 1720927 2.14% 848
chr19 7322035 12.49% 1435
chr20 857352 1.33% 431
chr21 1732578 3.71% 779
chr22 404519 0.80% 208
chrX 110930 0.07% 55
chrY 117430 0.21% 47
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 36155 670 90052 2326.78 1798
global segment-length histogram

Files

Filename Size md5
ENCFF961RIU.bed.gz 779.38 KB 8b49c47c9451c16b925d295ab2d22a4e
ENCFF961RIU.tabix.bed.gz 386.32 KB 8221017b57d73da87ee662a819f37b85
ENCFF961RIU.tabix.bed.gz.tbi 188.48 KB f0cd166685a045385edc491d3af9f98c
genomic_resource.yaml 1.51 KB e313dff3d26dd05c7f6f5ab388b9d7e3
statistics/