Resource

Id Histone_ChIP-seq/ENCSR082SHTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR082SHT [biosample_summary="Homo sapiens adipose tissue tissue male adult (34 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR082SHT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001013/
  • biosample_summary: Homo sapiens adipose tissue tissue male adult (34 years)
  • date_created: 2015-10-01T07:16:38.611583+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR082SHT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (34 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR082SHT float

Histone_ChIP-seq_ENCSR082SHT
Histone_ChIP-seq ENCSR082SHT [biosample_summary="Homo sapiens adipose tissue tissue male adult (34 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR082SHT [1.45, 20.1]
n
9,066,704
mean
5.81
sd
2.17

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 90667040.28% 17354
chr1 1019856 0.41% 1953
chr2 672250 0.28% 1324
chr3 518750 0.26% 991
chr4 275247 0.14% 523
chr5 428693 0.24% 793
chr6 477139 0.28% 863
chr7 362484 0.23% 720
chr8 319098 0.22% 631
chr9 386064 0.28% 752
chr10 430743 0.32% 830
chr11 543506 0.40% 1013
chr12 484516 0.36% 889
chr13 158007 0.14% 304
chr14 334727 0.31% 640
chr15 300656 0.29% 600
chr16 307654 0.34% 608
chr17 623508 0.75% 1173
chr18 140448 0.17% 290
chr19 563354 0.96% 1034
chr20 248186 0.39% 490
chr21 98602 0.21% 201
chr22 233801 0.46% 464
chrM 7220 43.58% 10
chrUn_GL000219v1 298 0.17% 1
chrX 126952 0.08% 247
chrY 4945 0.01% 10
3340 contigs with no values (128881318 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 17354 165 4671 522.46 422
global segment-length histogram

Files

Filename Size md5
ENCFF154CXY.bed.gz 361.37 KB 324cf07a42f095b3d7d3ef2b70e6df09
ENCFF154CXY.tabix.bed.gz 178.51 KB 28a1ed24e40bf32b8a4ab19c6866905f
ENCFF154CXY.tabix.bed.gz.tbi 97.26 KB 8c3426d51cf819413a4be593a9ae283f
genomic_resource.yaml 1.99 KB be5fada647a486eb3e17239cb9b51d9c
statistics/