Resource

Id Histone_ChIP-seq/ENCSR080QVOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR080QVO [biosample_summary="Homo sapiens right lobe of liver tissue female adult (53 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR080QVO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001114/
  • biosample_summary: Homo sapiens right lobe of liver tissue female adult (53 years)
  • date_created: 2017-01-24T04:37:11.100933+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR080QVO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR080QVO float

Histone_ChIP-seq_ENCSR080QVO
Histone_ChIP-seq ENCSR080QVO [biosample_summary="Homo sapiens right lobe of liver tissue female adult (53 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR080QVO [1.82, 11]
n
16,244,914
mean
3.82
sd
0.903

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 162449140.50% 41431
chr1 1632768 0.66% 4299
chr2 1078550 0.45% 2927
chr3 937906 0.47% 2466
chr4 580573 0.31% 1591
chr5 785644 0.43% 2099
chr6 656165 0.38% 1785
chr7 691344 0.43% 1834
chr8 528085 0.36% 1415
chr9 723931 0.52% 1837
chr10 691432 0.52% 1826
chr11 856873 0.63% 2176
chr12 1008071 0.76% 2462
chr13 284344 0.25% 780
chr14 567102 0.53% 1466
chr15 565873 0.55% 1483
chr16 740361 0.82% 1877
chr17 935157 1.12% 2371
chr18 218997 0.27% 614
chr19 1567568 2.67% 2995
chr20 459989 0.71% 1216
chr21 181437 0.39% 474
chr22 432319 0.85% 1091
chrX 120425 0.08% 347
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 41431 135 7842 392.1 316
global segment-length histogram

Files

Filename Size md5
ENCFF808ULR.bed.gz 741.22 KB ef8f51d765aebce87c9d47a5970c4b29
ENCFF808ULR.tabix.bed.gz 392.94 KB 359127f771207214d8eeee9a09c5d843
ENCFF808ULR.tabix.bed.gz.tbi 124.39 KB 3dcfab8066e63751e584813d522cd343
genomic_resource.yaml 1.75 KB 3ed888b0f5d32e9f045027698a7fedbe
statistics/