Resource

Id Histone_ChIP-seq/ENCSR079NLYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR079NLY [biosample_summary="Homo sapiens esophagus squamous epithelium tissue male adult (37 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR079NLY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue male adult (37 years)
  • date_created: 2019-08-14T04:35:49.722304+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR079NLY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR079NLY float

Histone_ChIP-seq_ENCSR079NLY
Histone_ChIP-seq ENCSR079NLY [biosample_summary="Homo sapiens esophagus squamous epithelium tissue male adult (37 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR079NLY [1.55, 23.4]
n
250,139,714
mean
6.64
sd
2.84

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2501397147.77% 82420
chr1 24961676 10.03% 7886
chr1_KI270711v1_random 1889 4.48% 2
chr2 19912970 8.22% 6939
chr3 15989993 8.06% 5648
chr4 11029768 5.80% 4189
chr5 12423764 6.84% 4167
chr6 11910360 6.97% 4397
chr7 11553292 7.25% 4184
chr8 9352318 6.44% 3315
chr9 10790373 7.80% 3607
chr10 11573057 8.65% 3937
chr11 12269053 9.08% 3850
chr12 13390273 10.05% 4151
chr13 5647372 4.94% 2127
chr14 8907904 8.32% 2771
chr14_GL000194v1_random 747 0.39% 1
chr15 9402933 9.22% 3220
chr16 10033315 11.11% 2770
chr17 13197063 15.85% 3807
chr17_GL000205v2_random 824 0.44% 1
chr18 4821057 6.00% 1859
chr19 12420617 21.19% 3077
chr20 7175801 11.13% 2067
chr21 2904820 6.22% 835
chr22 5660986 11.14% 1530
chrUn_GL000219v1 13358 7.45% 8
chrX 4448820 2.85% 1915
chrY 345311 0.60% 160
3338 contigs with no values (128478617 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 82420 280 107859 3034.94 1438
global segment-length histogram

Files

Filename Size md5
ENCFF319SFF.bed.gz 1.92 MB a77015735b93424dd244e894e8202f25
ENCFF319SFF.tabix.bed.gz 890.04 KB 174a1ce77092ce31c5512f7b4d25b6fc
ENCFF319SFF.tabix.bed.gz.tbi 143.43 KB d882ebe8a8828a2318f590c8d9cc68cf
genomic_resource.yaml 1.56 KB 53507d7cc2bb67a349b1e7dfd8b3a9e0
statistics/