Resource

Id Histone_ChIP-seq/ENCSR078LIZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR078LIZ [biosample_summary="Homo sapiens colonic mucosa tissue female adult (41 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR078LIZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000317/
  • biosample_summary: Homo sapiens colonic mucosa tissue female adult (41 years)
  • date_created: 2021-04-30T04:18:07.711779+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR078LIZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR078LIZ float

Histone_ChIP-seq_ENCSR078LIZ
Histone_ChIP-seq ENCSR078LIZ [biosample_summary="Homo sapiens colonic mucosa tissue female adult (41 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR078LIZ [1.72, 42.2]
n
70,039,826
mean
9.35
sd
5.92

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 700398262.18% 48376
chr1 7268028 2.92% 4917
chr2 5170982 2.14% 3657
chr3 4114196 2.07% 2925
chr4 2839181 1.49% 2012
chr5 3387805 1.87% 2387
chr6 3897463 2.28% 2720
chr7 3214067 2.02% 2299
chr8 2561844 1.77% 1899
chr9 3205396 2.32% 2236
chr10 3321067 2.48% 2369
chr11 3844919 2.85% 2521
chr12 3731119 2.80% 2446
chr13 1468554 1.28% 1044
chr14 2520213 2.35% 1721
chr15 2448592 2.40% 1651
chr16 2634541 2.92% 1837
chr17 4182368 5.02% 2635
chr18 1248967 1.55% 903
chr19 3241932 5.53% 2137
chr20 1960680 3.04% 1340
chr21 861488 1.84% 607
chr22 1663039 3.27% 1098
chrX 1253385 0.80% 1015
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 48376 230 39735 1447.82 1103
global segment-length histogram

Files

Filename Size md5
ENCFF549AXK.bed.gz 1.17 MB 45bcbcef456f16d3430b54df3ca023af
ENCFF549AXK.tabix.bed.gz 535.1 KB 5fb952fecc89329c56d5041892a97137
ENCFF549AXK.tabix.bed.gz.tbi 202.0 KB 42eff4294cdf93212e96a7e0a72e503c
genomic_resource.yaml 1.52 KB 4bbc690a1657f7f38d2466d74bfcf8cc
statistics/