Resource

Id Histone_ChIP-seq/ENCSR074WIBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR074WIB [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (37 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR074WIB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue male adult (37 years)
  • date_created: 2018-04-26T17:32:30.864631+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR074WIB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR074WIB float

Histone_ChIP-seq_ENCSR074WIB
Histone_ChIP-seq ENCSR074WIB [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (37 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR074WIB [1.29, 51.5]
n
55,504,974
mean
25.5
sd
13.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 555049741.73% 28588
chr1 5499110 2.21% 2849
chr1_KI270712v1_random 4572 2.60% 5
chr1_KI270713v1_random 1268 3.11% 3
chr1_KI270714v1_random 387 0.93% 1
chr2 3756980 1.55% 1953
chr3 3124580 1.58% 1568
chr4 2187769 1.15% 1107
chr5 2591951 1.43% 1313
chr6 3173746 1.86% 1616
chr7 2752343 1.73% 1451
chr8 2019246 1.39% 1072
chr9 2350469 1.70% 1218
chr9_KI270717v1_random 987 2.46% 1
chr10 2328973 1.74% 1264
chr11 2922431 2.16% 1424
chr12 2949151 2.21% 1437
chr13 1169097 1.02% 626
chr14 1743957 1.63% 855
chr14_GL000194v1_random 341 0.18% 1
chr15 1781800 1.75% 920
chr16 2254245 2.50% 1175
chr17 3330221 4.00% 1659
chr17_GL000205v2_random 2854 1.54% 2
chr18 918569 1.14% 510
chr19 3671265 6.26% 1934
chr20 1491855 2.31% 766
chr21 548347 1.17% 302
chr22 1288773 2.54% 699
chr22_KI270733v1_random 374 0.21% 1
chrUn_GL000195v1 1567 0.86% 2
chrUn_GL000219v1 6084 3.40% 4
chrUn_GL000220v1 729 0.45% 1
chrUn_KI270467v1 767 19.57% 1
chrUn_KI270742v1 495 0.27% 1
chrX 1573695 1.01% 822
chrY 55976 0.10% 25
3330 contigs with no values (127507131 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 28588 233 24976 1941.55 1592.5
global segment-length histogram

Files

Filename Size md5
ENCFF627BUH.bed.gz 817.87 KB ddd6a6723eb10f7b74b221b9725d0aa0
ENCFF627BUH.tabix.bed.gz 338.27 KB fce4fadf71a4a6acb0a1a811db14122f
ENCFF627BUH.tabix.bed.gz.tbi 175.28 KB 5971099b12627478b540af1400b4e6a9
genomic_resource.yaml 1.54 KB 0045687a2dcf4a113cbee307c8866bcf
statistics/