Resource

Id Histone_ChIP-seq/ENCSR069EGEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR069EGE [biosample_summary="Homo sapiens transverse colon tissue male adult (54 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR069EGE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001157/
  • biosample_summary: Homo sapiens transverse colon tissue male adult (54 years)
  • date_created: 2017-07-28T10:03:37.976197+00:00
  • date_released: 2017-10-30
  • doi: 10.17989/ENCSR069EGE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR069EGE float

Histone_ChIP-seq_ENCSR069EGE
Histone_ChIP-seq ENCSR069EGE [biosample_summary="Homo sapiens transverse colon tissue male adult (54 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR069EGE [1.21, 51.9]
n
133,791,569
mean
9.98
sd
7.35

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1337915694.16% 85161
chr1 13417815 5.39% 8242
chr2 10462492 4.32% 6865
chr3 8529649 4.30% 5578
chr4 5882190 3.09% 3965
chr5 6375310 3.51% 4242
chr6 7131305 4.18% 4809
chr7 6141180 3.85% 4122
chr8 4980678 3.43% 3472
chr9 6406082 4.63% 3985
chr10 7087930 5.30% 4480
chr11 7045442 5.22% 4232
chr12 7104426 5.33% 4287
chr13 3015926 2.64% 1974
chr14 4773831 4.46% 2867
chr15 4568217 4.48% 2953
chr16 4818346 5.33% 3005
chr17 7143967 8.58% 4116
chr18 2455858 3.06% 1719
chr19 5362196 9.15% 2984
chr20 3728064 5.78% 2381
chr21 1605476 3.44% 1106
chr22 2981211 5.87% 1776
chrX 2668908 1.71% 1903
chrY 105070 0.18% 98
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 85161 195 81847 1571.04 939
global segment-length histogram

Files

Filename Size md5
ENCFF964IXJ.bed.gz 2.21 MB 6bb13338d215bf6333b79b3e43602719
ENCFF964IXJ.tabix.bed.gz 954.86 KB ca745311025a7ab926a1840b11b01bce
ENCFF964IXJ.tabix.bed.gz.tbi 258.91 KB a34fc29af53811bdb3569972ef017272
genomic_resource.yaml 1.51 KB ad1b2d5873768a95500cd97a0cf863a8
statistics/