Resource

Id Histone_ChIP-seq/ENCSR064QOAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR064QOA [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR064QOA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-01-28T04:10:47.976967+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR064QOA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR064QOA float

Histone_ChIP-seq_ENCSR064QOA
Histone_ChIP-seq ENCSR064QOA [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR064QOA [1.67, 14.1]
n
72,780,992
mean
4.5
sd
1.84

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 727809922.26% 82008
chr1 2604812 1.05% 3001
chr2 2527959 1.04% 2829
chr3 1053955 0.53% 1206
chr4 1445126 0.76% 1501
chr5 1957030 1.08% 1992
chr6 2395457 1.40% 2274
chr7 1858297 1.17% 1856
chr8 1664941 1.15% 1999
chr9 1139972 0.82% 1241
chr10 2339756 1.75% 2751
chr11 1556158 1.15% 1841
chr12 1825345 1.37% 1923
chr13 785836 0.69% 854
chr14 1639889 1.53% 1720
chr15 1409487 1.38% 1721
chr16 1507714 1.67% 1873
chr17 2137195 2.57% 2116
chr18 713941 0.89% 853
chr19 1412881 2.41% 1618
chr20 1303486 2.02% 1587
chr21 588589 1.26% 795
chr22 596729 1.17% 837
chrX 38315898 24.56% 43618
chrY 539 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 82008 190 89699 887.49 611
global segment-length histogram

Files

Filename Size md5
ENCFF860PKW.bed.gz 1.45 MB a8cb39dc4f60d3653fceb0a3a9a2aaee
ENCFF860PKW.tabix.bed.gz 774.55 KB a9455bc79bbfabb3b5e1e021d51ca703
ENCFF860PKW.tabix.bed.gz.tbi 163.28 KB e78057ad3ed5b80201beef29435687a7
genomic_resource.yaml 1.78 KB a7face5db99a1b6327b31fd1e023ac50
statistics/