Resource

Id Histone_ChIP-seq/ENCSR057YVOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR057YVO [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (53 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR057YVO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue female adult (53 years)
  • date_created: 2016-10-22T16:06:38.289772+00:00
  • date_released: 2016-11-07
  • doi: 10.17989/ENCSR057YVO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR057YVO float

Histone_ChIP-seq_ENCSR057YVO
Histone_ChIP-seq ENCSR057YVO [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (53 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR057YVO [1.45, 6.75]
n
365,149
mean
3.57
sd
0.872

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3651490.01% 1148
chr1 15688 0.01% 48
chr2 12829 0.01% 49
chr3 13952 0.01% 42
chr4 27732 0.01% 84
chr5 18252 0.01% 64
chr6 8652 0.01% 27
chr7 13438 0.01% 47
chr8 7762 0.01% 27
chr9 6985 0.01% 25
chr10 15090 0.01% 55
chr11 7583 0.01% 28
chr12 19407 0.01% 58
chr13 4912 <0.01% 19
chr14 2983 <0.01% 11
chr15 11066 0.01% 31
chr16 21207 0.02% 68
chr17 6667 0.01% 21
chr18 3117 <0.01% 12
chr19 106533 0.18% 289
chr20 3734 0.01% 12
chr21 23817 0.05% 77
chr22 973 <0.01% 4
chrX 8677 0.01% 32
chrY 4093 0.01% 18
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1148 105 1546 318.07 271
global segment-length histogram

Files

Filename Size md5
ENCFF181QUT.bed.gz 23.39 KB ea2c417464a148be946e570df0f5208a
ENCFF181QUT.tabix.bed.gz 11.85 KB daba12f0144200a59d79e421d6371a6e
ENCFF181QUT.tabix.bed.gz.tbi 12.86 KB 34005afcd279de9971ad020a083ba498
genomic_resource.yaml 1.57 KB f5485be87cfccde30a5228f67e5ea7b1
statistics/