Resource

Id Histone_ChIP-seq/ENCSR052ETCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR052ETC [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR052ETC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-08-25T18:07:44.050604+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR052ETC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR052ETC float

Histone_ChIP-seq_ENCSR052ETC
Histone_ChIP-seq ENCSR052ETC [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR052ETC [1.66, 7.82]
n
8,648,292
mean
4.08
sd
1.07

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 86482920.27% 11684
chr1 428332 0.17% 506
chr2 524211 0.22% 520
chr3 180464 0.09% 221
chr4 334143 0.18% 347
chr5 413832 0.23% 432
chr6 572326 0.34% 622
chr7 474702 0.30% 424
chr8 250297 0.17% 312
chr9 231095 0.17% 245
chr10 414578 0.31% 461
chr11 207884 0.15% 258
chr12 311691 0.23% 329
chr13 164973 0.14% 185
chr14 255814 0.24% 287
chr15 207110 0.20% 273
chr16 225266 0.25% 297
chr17 422743 0.51% 445
chr18 130997 0.16% 152
chr19 206596 0.35% 324
chr20 190805 0.30% 264
chr21 92788 0.20% 127
chr22 57524 0.11% 98
chrX 2350121 1.51% 4555
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 11684 205 12017 740.18 520
global segment-length histogram

Files

Filename Size md5
ENCFF200YMV.bed.gz 209.57 KB 130cb1ec2321006ad02292f4c3bb64c2
ENCFF200YMV.tabix.bed.gz 112.53 KB d6d6155a082f5b05af52e0f29ef101a8
ENCFF200YMV.tabix.bed.gz.tbi 60.37 KB 98a07223bc729f30048e9f8f83040d8a
genomic_resource.yaml 2.26 KB 09a63974b934600beaa7f0eaa118539b
statistics/