Resource

Id Histone_ChIP-seq/ENCSR049FUBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR049FUB [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (51 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR049FUB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue female adult (51 years)
  • date_created: 2017-12-06T21:01:14.218377+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR049FUB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR049FUB float

Histone_ChIP-seq_ENCSR049FUB
Histone_ChIP-seq ENCSR049FUB [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (51 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR049FUB [1.57, 6.66]
n
5,383,900
mean
3.38
sd
0.801

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 53839000.17% 10578
chr1 426947 0.17% 820
chr2 474673 0.20% 802
chr3 192647 0.10% 377
chr4 221163 0.12% 436
chr5 264797 0.15% 527
chr6 326240 0.19% 667
chr7 352368 0.22% 593
chr8 216402 0.15% 404
chr9 233123 0.17% 434
chr10 311333 0.23% 539
chr11 228963 0.17% 453
chr12 257540 0.19% 480
chr13 145447 0.13% 282
chr14 140644 0.13% 294
chr15 154763 0.15% 283
chr16 170619 0.19% 346
chr17 334230 0.40% 557
chr18 83419 0.10% 170
chr19 291421 0.50% 530
chr20 166151 0.26% 321
chr21 41178 0.09% 89
chr22 79008 0.16% 179
chrX 270617 0.17% 994
chrY 207 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 10578 115 8177 508.97 344.5
global segment-length histogram

Files

Filename Size md5
ENCFF639ADZ.bed.gz 209.19 KB 60999c73b407f5ff60667273416d0b64
ENCFF639ADZ.tabix.bed.gz 106.71 KB a164b40acfaa8a90c86942011dc46c5e
ENCFF639ADZ.tabix.bed.gz.tbi 54.19 KB 4191c8cac4153df957b1e10a08e764d0
genomic_resource.yaml 1.57 KB 3f96c6d7eb324c3a3f78df337f41b1bb
statistics/