Resource

Id Histone_ChIP-seq/ENCSR047JMVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR047JMV [biosample_summary="Homo sapiens transverse colon tissue female adult (53 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR047JMV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001157/
  • biosample_summary: Homo sapiens transverse colon tissue female adult (53 years)
  • date_created: 2017-12-06T21:18:48.408893+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR047JMV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR047JMV float

Histone_ChIP-seq_ENCSR047JMV
Histone_ChIP-seq ENCSR047JMV [biosample_summary="Homo sapiens transverse colon tissue female adult (53 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR047JMV [1.46, 4.32]
n
649,128
mean
2.66
sd
0.376

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 6491280.02% 3154
chr1 61231 0.02% 312
chr2 42769 0.02% 233
chr3 25225 0.01% 141
chr4 34590 0.02% 185
chr5 28554 0.02% 151
chr6 26263 0.02% 139
chr7 28164 0.02% 129
chr8 17796 0.01% 87
chr9 27782 0.02% 130
chr10 23566 0.02% 124
chr11 20078 0.01% 116
chr12 38993 0.03% 191
chr13 9307 0.01% 53
chr14 20302 0.02% 110
chr15 19132 0.02% 103
chr16 20541 0.02% 96
chr17 25617 0.03% 130
chr18 10622 0.01% 51
chr19 146149 0.25% 547
chr20 8284 0.01% 44
chr21 2351 0.01% 13
chr22 5462 0.01% 32
chrX 6350 <0.01% 37
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 3154 110 1391 205.81 177
global segment-length histogram

Files

Filename Size md5
ENCFF637FXC.bed.gz 59.8 KB 07ca08e48fb9430a1f2a8b5b227b1a59
ENCFF637FXC.tabix.bed.gz 32.95 KB c65a5a5e5b37d8c645420bac2c3129c2
ENCFF637FXC.tabix.bed.gz.tbi 29.59 KB 0ffc44324d57a9baf8b982a5adae1ddf
genomic_resource.yaml 1.52 KB a666978c37bedde45a441c319b8554c3
statistics/