Resource

Id Histone_ChIP-seq/ENCSR046OONcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR046OON [biosample_summary="Homo sapiens vagina tissue female adult (51 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR046OON
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000996/
  • biosample_summary: Homo sapiens vagina tissue female adult (51 years)
  • date_created: 2018-10-31T03:00:48.645782+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR046OON
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR046OON float

Histone_ChIP-seq_ENCSR046OON
Histone_ChIP-seq ENCSR046OON [biosample_summary="Homo sapiens vagina tissue female adult (51 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR046OON [1.26, 14.1]
n
96,027,228
mean
4.48
sd
1.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 960272282.98% 74738
chr1 9744487 3.91% 7332
chr2 7310279 3.02% 6224
chr3 5739269 2.89% 4785
chr4 3678966 1.93% 3326
chr5 4690907 2.58% 3791
chr6 4357808 2.55% 3681
chr7 4279380 2.69% 3463
chr8 3087000 2.13% 2683
chr9 4120903 2.98% 3121
chr10 4160184 3.11% 3329
chr11 4861497 3.60% 3643
chr12 5636624 4.23% 4110
chr13 1833153 1.60% 1646
chr14 3498667 3.27% 2754
chr15 3644390 3.57% 2996
chr16 4295326 4.75% 2996
chr17 5470289 6.57% 3919
chr18 1564718 1.95% 1414
chr19 6755065 11.52% 3927
chr20 2799953 4.34% 2116
chr21 1132593 2.42% 881
chr22 2440182 4.80% 1676
chrX 925588 0.59% 925
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 74738 230 21185 1284.85 904
global segment-length histogram

Files

Filename Size md5
ENCFF643BMR.bed.gz 1.55 MB f45680aade1a5349c19da53b1f1f3e7b
ENCFF643BMR.tabix.bed.gz 775.13 KB 97ac08ca344f044181a46a44082215ae
ENCFF643BMR.tabix.bed.gz.tbi 145.97 KB 13ac5b7585ec93e25dc77bf0ec075e5e
genomic_resource.yaml 1.5 KB 1c70f3e0f72d30625db1ed2ee1b4bedb
statistics/