Resource

Id Histone_ChIP-seq/ENCSR043RXIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR043RXI [biosample_summary="Homo sapiens sigmoid colon tissue male adult (37 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR043RXI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue male adult (37 years)
  • date_created: 2019-04-27T23:23:58.480293+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR043RXI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR043RXI float

Histone_ChIP-seq_ENCSR043RXI
Histone_ChIP-seq ENCSR043RXI [biosample_summary="Homo sapiens sigmoid colon tissue male adult (37 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR043RXI [1.32, 12.3]
n
178,403,318
mean
4.74
sd
1.55

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1784033185.55% 72289
chr1 17448803 7.01% 6718
chr1_KI270711v1_random 1847 4.38% 2
chr2 14214270 5.87% 6030
chr3 11523489 5.81% 4896
chr4 7819669 4.11% 3579
chr5 8766955 4.83% 3527
chr6 8368012 4.90% 3607
chr7 8140291 5.11% 3604
chr8 6112754 4.21% 2715
chr9 8180260 5.91% 3287
chr10 8184084 6.12% 3372
chr11 9228373 6.83% 3521
chr12 9992100 7.50% 3672
chr13 4129034 3.61% 2001
chr14 6355841 5.94% 2568
chr15 6883565 6.75% 2739
chr16 7397890 8.19% 2620
chr17 9516079 11.43% 3402
chr17_GL000205v2_random 834 0.45% 1
chr18 3109711 3.87% 1442
chr19 9498715 16.20% 3256
chr20 5037953 7.82% 1937
chr21 2026637 4.34% 766
chr22 3994928 7.86% 1403
chrM 9143 55.18% 5
chrUn_GL000219v1 10825 6.04% 9
chrUn_KI270337v1 498 44.42% 1
chrUn_KI270438v1 3378 3.00% 7
chrUn_KI270466v1 1043 84.59% 1
chrUn_KI270467v1 1719 43.85% 1
chrX 2324896 1.49% 1527
chrY 119722 0.21% 73
3334 contigs with no values (128534738 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 72289 260 78652 2467.92 1361
global segment-length histogram

Files

Filename Size md5
ENCFF603JVZ.bed.gz 1.75 MB d0fa8a6e2accbdb2f41248ffb80d8943
ENCFF603JVZ.tabix.bed.gz 792.06 KB a70c3e8fa3bfd9e43f95e906b9d81afc
ENCFF603JVZ.tabix.bed.gz.tbi 139.0 KB 1ce95e882d68eda3cb112b393f4c98f7
genomic_resource.yaml 1.51 KB 3d2536e1b064880b706185db4993e213
statistics/