Resource

Id Histone_ChIP-seq/ENCSR039ZLScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR039ZLS [biosample_summary="Homo sapiens IMR-90" and target="H3K4ac"]
Description
Labels
  • accession: ENCSR039ZLS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001196/
  • biosample_summary: Homo sapiens IMR-90
  • date_created: 2015-10-01T07:16:03.289771+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR039ZLS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR039ZLS float

Histone_ChIP-seq_ENCSR039ZLS
Histone_ChIP-seq ENCSR039ZLS [biosample_summary="Homo sapiens IMR-90" and target="H3K4ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR039ZLS [1.62, 61.6]
n
93,400,503
mean
8.55
sd
5.04

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 934005032.90% 192585
chr1 8436761 3.39% 17018
chr2 8500814 3.51% 17451
chr3 5968249 3.01% 12522
chr4 3954092 2.08% 9249
chr5 5583429 3.08% 11598
chr6 5318679 3.11% 12011
chr7 4453135 2.79% 9604
chr8 4450234 3.07% 9780
chr9 4263772 3.08% 8455
chr10 4449408 3.33% 9205
chr11 5377519 3.98% 10448
chr12 4667323 3.50% 9702
chr13 2354005 2.06% 5344
chr14 2890899 2.70% 5812
chr15 3638905 3.57% 7120
chr16 3125668 3.46% 5716
chr17 4401510 5.29% 8027
chr18 2057770 2.56% 4628
chr19 2622417 4.47% 4895
chr20 2422267 3.76% 4814
chr21 1287900 2.76% 2623
chr22 1876611 3.69% 3450
chrX 1299136 0.83% 3113
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 192585 118 13511 484.98 346
global segment-length histogram

Files

Filename Size md5
ENCFF505LAX.bed.gz 4.64 MB 745f5a9a113919bf69fbbcd2fe11707f
ENCFF505LAX.tabix.bed.gz 1.97 MB 04200fcea4eb9d57e2a0a85e8a6d3ff3
ENCFF505LAX.tabix.bed.gz.tbi 308.13 KB 44c537d723fd813cb6a89f9bea406e6a
genomic_resource.yaml 2.09 KB c9b813da149e4bc361c6ea2e4439b169
statistics/