Resource

Id Histone_ChIP-seq/ENCSR039TGBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR039TGB [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (78 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR039TGB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue male adult (78 years)
  • date_created: 2021-01-28T04:10:54.293091+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR039TGB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (78 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR039TGB float

Histone_ChIP-seq_ENCSR039TGB
Histone_ChIP-seq ENCSR039TGB [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (78 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR039TGB [1.6, 11.2]
n
21,183,216
mean
4.59
sd
1.86

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 211832160.66% 22865
chr1 1592282 0.64% 1773
chr2 1638282 0.68% 1775
chr3 660857 0.33% 773
chr4 1006381 0.53% 1051
chr5 1218685 0.67% 1222
chr6 1695432 0.99% 1517
chr7 1181377 0.74% 1101
chr8 875112 0.60% 992
chr9 681202 0.49% 701
chr10 1321937 0.99% 1462
chr11 743137 0.55% 834
chr12 1000353 0.75% 1011
chr13 565548 0.49% 608
chr14 1053831 0.98% 1206
chr15 818238 0.80% 1009
chr16 901663 1.00% 1117
chr17 1193718 1.43% 1124
chr18 478176 0.59% 577
chr19 882244 1.51% 1030
chr20 757869 1.18% 873
chr21 406216 0.87% 478
chr22 342027 0.67% 434
chrX 166203 0.11% 192
chrY 2446 <0.01% 5
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 22865 225 30628 926.45 562
global segment-length histogram

Files

Filename Size md5
ENCFF321ZZK.bed.gz 428.42 KB 0af8404c908785e834fa71f899e80355
ENCFF321ZZK.tabix.bed.gz 225.3 KB d5bfa8dc0d870e03c1c6b08acfe72465
ENCFF321ZZK.tabix.bed.gz.tbi 98.73 KB 499d05c1da2dd72fb9180421039acb27
genomic_resource.yaml 1.56 KB d309259ad2cd91abe4ad559c4a3f4a90
statistics/