Resource

Id Histone_ChIP-seq/ENCSR039AHRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR039AHR [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR039AHR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 6 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:14.927002+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR039AHR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 6 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR039AHR float

Histone_ChIP-seq_ENCSR039AHR
Histone_ChIP-seq ENCSR039AHR [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR039AHR [1.16, 71]
n
87,904,108
mean
12.4
sd
11.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 879041082.73% 94832
chr1 8229628 3.31% 8782
chr1_KI270713v1_random 1030 2.53% 2
chr2 6368250 2.63% 6919
chr3 4483567 2.26% 4936
chr3_GL000221v1_random 755 0.49% 2
chr4 2956160 1.55% 3358
chr5 4329062 2.38% 4570
chr6 4383344 2.57% 4651
chr7 4340884 2.72% 4932
chr8 3932346 2.71% 4406
chr9 3782251 2.73% 4125
chr9_KI270719v1_random 411 0.23% 1
chr10 4192466 3.13% 4559
chr11 4089267 3.03% 4314
chr11_KI270721v1_random 687 0.68% 1
chr12 4271570 3.21% 4507
chr13 1904735 1.67% 1995
chr14 2912925 2.72% 3005
chr14_GL000009v2_random 473 0.23% 1
chr14_GL000194v1_random 1168 0.61% 2
chr14_GL000225v1_random 2407 1.14% 8
chr14_KI270723v1_random 1285 3.37% 2
chr15 2789574 2.74% 3088
chr15_KI270727v1_random 462 0.10% 1
chr16 4181266 4.63% 4598
chr16_KI270728v1_random 900 0.05% 2
chr17 5381119 6.46% 5505
chr17_GL000205v2_random 12105 6.52% 10
chr18 1686012 2.10% 1896
chr19 4979436 8.49% 5146
chr20 2981290 4.63% 3244
chr21 1222734 2.62% 1370
chr22 2586961 5.09% 2804
chr22_KI270731v1_random 255 0.17% 1
chr22_KI270733v1_random 1126 0.63% 3
chrUn_GL000195v1 1456 0.80% 4
chrUn_GL000216v2 1113 0.63% 3
chrUn_GL000219v1 2649 1.48% 3
chrUn_GL000224v1 1935 1.08% 4
chrUn_KI270438v1 2714 2.41% 4
chrUn_KI270519v1 265 0.19% 1
chrUn_KI270744v1 4163 2.47% 5
chrUn_KI270753v1 2099 3.33% 4
chrUn_KI270755v1 291 0.79% 1
chrX 1877780 1.20% 2055
chrY 1732 <0.01% 2
3320 contigs with no values (123887027 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 94832 250 26755 926.95 490
global segment-length histogram

Files

Filename Size md5
ENCFF826NQT.bed.gz 1.97 MB e403780c1de512233983f366c1c0ddf9
ENCFF826NQT.tabix.bed.gz 960.95 KB d0a5f16f2cc77267e0b8a789b0b0476f
ENCFF826NQT.tabix.bed.gz.tbi 252.32 KB 3729ebc6241f79792466dfb51778bf15
genomic_resource.yaml 3.11 KB b2482b064991ef63f5b5df39b26d7243
statistics/