Resource

Id Histone_ChIP-seq/ENCSR038ODIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR038ODI [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (54 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR038ODI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue male adult (54 years)
  • date_created: 2017-12-06T21:13:03.382984+00:00
  • date_released: 2018-12-14
  • doi: 10.17989/ENCSR038ODI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR038ODI float

Histone_ChIP-seq_ENCSR038ODI
Histone_ChIP-seq ENCSR038ODI [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (54 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR038ODI [1.33, 9.78]
n
19,573,675
mean
3.47
sd
1.16

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 195736750.61% 25558
chr1 1240743 0.50% 1763
chr2 1131072 0.47% 1752
chr3 957816 0.48% 1516
chr4 1048057 0.55% 1465
chr5 1345268 0.74% 1806
chr6 775628 0.45% 1294
chr7 1132109 0.71% 1579
chr8 955049 0.66% 1392
chr9 716635 0.52% 963
chr10 796488 0.60% 1108
chr11 762887 0.56% 1142
chr12 1088717 0.82% 1440
chr13 403503 0.35% 654
chr14 438307 0.41% 700
chr15 495147 0.49% 686
chr16 598697 0.66% 721
chr17 353964 0.43% 469
chr18 321906 0.40% 502
chr19 4169449 7.11% 3260
chr20 302726 0.47% 490
chr21 255547 0.55% 398
chr22 219723 0.43% 351
chrX 54765 0.04% 90
chrY 9472 0.02% 17
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 25558 220 40754 765.85 529
global segment-length histogram

Files

Filename Size md5
ENCFF706CZX.bed.gz 499.0 KB 182c9f4a915beb368238f3ddf2f95152
ENCFF706CZX.tabix.bed.gz 260.46 KB df0075b9f1ed057c0eb1b58b9152a795
ENCFF706CZX.tabix.bed.gz.tbi 137.14 KB 359c8606ddf7abb438c5c3da2bb546fc
genomic_resource.yaml 1.75 KB a711f3b8e7fe77cc15d2bd7d9931a65c
statistics/