Resource

Id Histone_ChIP-seq/ENCSR038KSTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR038KST [biosample_summary="Homo sapiens adrenal gland tissue female adult (41 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR038KST
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue female adult (41 years)
  • date_created: 2021-01-28T22:02:08.993323+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR038KST
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR038KST float

Histone_ChIP-seq_ENCSR038KST
Histone_ChIP-seq ENCSR038KST [biosample_summary="Homo sapiens adrenal gland tissue female adult (41 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR038KST [1.49, 9.6]
n
123,835,104
mean
3.48
sd
0.944

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1238351043.85% 106454
chr1 12610022 5.07% 10519
chr2 10504375 4.34% 8913
chr3 8660425 4.37% 7504
chr4 4978548 2.62% 4519
chr5 6601718 3.64% 5714
chr6 6622563 3.88% 5897
chr7 5978761 3.75% 5394
chr8 5410627 3.73% 4738
chr9 5511907 3.98% 4709
chr10 6518431 4.87% 5565
chr11 6571530 4.86% 5539
chr12 6644034 4.99% 5575
chr13 2783772 2.43% 2478
chr14 4083656 3.81% 3463
chr15 4287369 4.20% 3708
chr16 4264827 4.72% 3571
chr17 6474341 7.78% 5233
chr18 2486874 3.09% 2198
chr19 4183974 7.14% 3669
chr20 3530474 5.48% 2914
chr21 1221550 2.62% 1124
chr22 2915317 5.74% 2359
chrX 990009 0.63% 1151
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 106454 215 23050 1163.27 879
global segment-length histogram

Files

Filename Size md5
ENCFF876NSG.bed.gz 2.4 MB 1c5451fb9a4df86b7bf14c05fe8e6946
ENCFF876NSG.tabix.bed.gz 1.11 MB c5a54f60ca4518709e7448c3974e7514
ENCFF876NSG.tabix.bed.gz.tbi 296.57 KB 03c2699cab5aeea0764765edb53a31b8
genomic_resource.yaml 1.51 KB 3a5e644ec620369d18e1541906605314
statistics/