Resource

Id Histone_ChIP-seq/ENCSR035BZIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR035BZI [biosample_summary="Homo sapiens mesendoderm originated from H1" and target="H4K5ac"]
Description
Labels
  • accession: ENCSR035BZI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/in_vitro_differentiated_cells_NTR_0000856/
  • biosample_summary: Homo sapiens mesendoderm originated from H1
  • date_created: 2015-10-01T07:16:17.056821+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR035BZI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo
  • status: released
  • submitter_comment:
  • target: H4K5ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR035BZI float

Histone_ChIP-seq_ENCSR035BZI
Histone_ChIP-seq ENCSR035BZI [biosample_summary="Homo sapiens mesendoderm originated from H1" and target="H4K5ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR035BZI [1.81, 10.3]
n
3,368,743
mean
4.08
sd
0.957

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 33687430.10% 14567
chr1 356947 0.14% 1461
chr2 264008 0.11% 1178
chr3 221257 0.11% 967
chr4 172914 0.09% 771
chr5 193625 0.11% 835
chr6 190002 0.11% 850
chr7 142439 0.09% 642
chr8 143271 0.10% 648
chr9 121929 0.09% 557
chr10 170138 0.13% 721
chr11 182014 0.13% 778
chr12 185253 0.14% 798
chr13 79097 0.07% 360
chr14 123467 0.12% 526
chr15 109240 0.11% 454
chr16 113111 0.13% 470
chr17 148071 0.18% 600
chr18 97643 0.12% 403
chr19 119138 0.20% 501
chr20 92960 0.14% 397
chr21 32892 0.07% 148
chr22 60968 0.12% 258
chrX 45890 0.03% 230
chrY 2469 <0.01% 14
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 14567 130 1226 231.26 199
global segment-length histogram

Files

Filename Size md5
ENCFF979WWJ.bed.gz 266.59 KB d198bed144ded7a3de2d59eff6e65aec
ENCFF979WWJ.tabix.bed.gz 140.81 KB 6529a39fd98233e5a17f58807758a611
ENCFF979WWJ.tabix.bed.gz.tbi 108.23 KB 2d28d7d9c9f53f8255a3a2028b7cf605
genomic_resource.yaml 1.47 KB 0f1ed92ae9090926a7d91aced083a511
statistics/