Resource

Id Histone_ChIP-seq/ENCSR024DUVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR024DUV [biosample_summary="Homo sapiens colonic mucosa tissue female adult (56 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR024DUV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000317/
  • biosample_summary: Homo sapiens colonic mucosa tissue female adult (56 years)
  • date_created: 2015-09-15T19:51:44.743347+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR024DUV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (56 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR024DUV float

Histone_ChIP-seq_ENCSR024DUV
Histone_ChIP-seq ENCSR024DUV [biosample_summary="Homo sapiens colonic mucosa tissue female adult (56 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR024DUV [1.95, 10.8]
n
12,626,610
mean
4.63
sd
1.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 126266100.39% 26049
chr1 1320405 0.53% 2636
chr2 744882 0.31% 1608
chr3 736130 0.37% 1503
chr4 336212 0.18% 771
chr5 474886 0.26% 1034
chr6 474702 0.28% 1007
chr7 509690 0.32% 1112
chr8 288604 0.20% 669
chr9 600725 0.43% 1208
chr10 416091 0.31% 929
chr11 725106 0.54% 1448
chr12 807536 0.61% 1585
chr13 130545 0.11% 311
chr14 404262 0.38% 888
chr15 432186 0.42% 902
chr16 763691 0.85% 1538
chr17 982748 1.18% 1949
chr18 135967 0.17% 315
chr19 1084914 1.85% 2147
chr20 484805 0.75% 949
chr21 147091 0.31% 309
chr22 527633 1.04% 1004
chrX 97799 0.06% 227
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 26049 230 4073 484.73 408
global segment-length histogram

Files

Filename Size md5
ENCFF732NMQ.bed.gz 454.12 KB 1edb50d39641ae6e8f155d323cf7f823
ENCFF732NMQ.tabix.bed.gz 246.11 KB b3264ebc53f8a0aae6bbe7b08d070ffa
ENCFF732NMQ.tabix.bed.gz.tbi 103.56 KB d0bffeef86fd99a7019d53152f235d39
genomic_resource.yaml 2.02 KB 7cfce008f6caaf718e8d21ea3109b178
statistics/