Resource

Id Histone_ChIP-seq/ENCSR007HLHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR007HLH [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR007HLH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000625/
  • biosample_summary: Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)
  • date_created: 2015-09-16T21:42:05.514433+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR007HLH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (21 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR007HLH float

Histone_ChIP-seq_ENCSR007HLH
Histone_ChIP-seq ENCSR007HLH [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR007HLH [1.89, 123]
n
60,621,486
mean
20.4
sd
17.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 606214861.88% 44308
chr1 6364304 2.56% 4561
chr2 4826755 1.99% 3495
chr3 3569335 1.80% 2589
chr4 1880517 0.99% 1413
chr5 2956610 1.63% 2073
chr6 3634693 2.13% 2599
chr7 2708922 1.70% 2026
chr8 1964792 1.35% 1588
chr9 2195419 1.59% 1685
chr10 2704887 2.02% 1950
chr11 3216332 2.38% 2196
chr12 3211792 2.41% 2349
chr13 1182773 1.03% 907
chr14 2587499 2.42% 1667
chr15 1921597 1.88% 1357
chr16 2363768 2.62% 1891
chr17 3477307 4.18% 2563
chr18 938963 1.17% 715
chr19 3115796 5.32% 2341
chr20 1693617 2.63% 1277
chr21 626321 1.34% 494
chr22 1605465 3.16% 1151
chrX 1770605 1.13% 1346
chrY 103417 0.18% 75
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 44308 190 47562 1368.18 866
global segment-length histogram

Files

Filename Size md5
ENCFF269VVP.bed.gz 1.08 MB d0012693ac5b4cc1583aa51f7f54288d
ENCFF269VVP.tabix.bed.gz 489.23 KB c5b610bf53fb519797972f76a1fab8f1
ENCFF269VVP.tabix.bed.gz.tbi 153.55 KB aad2c0283b0905ef7f863de4850886e4
genomic_resource.yaml 1.76 KB 643c05706796d6936ff78c450281d931
statistics/