Resource

Id Histone_ChIP-seq/ENCSR006TUHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR006TUH [biosample_summary="Homo sapiens adrenal gland tissue female adult (51 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR006TUH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue female adult (51 years)
  • date_created: 2017-07-28T10:09:37.109246+00:00
  • date_released: 2018-12-15
  • doi: 10.17989/ENCSR006TUH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR006TUH float

Histone_ChIP-seq_ENCSR006TUH
Histone_ChIP-seq ENCSR006TUH [biosample_summary="Homo sapiens adrenal gland tissue female adult (51 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR006TUH [1.67, 18.3]
n
23,970,745
mean
8.13
sd
2.63

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 239707450.75% 19290
chr1 2384611 0.96% 1890
chr2 1685188 0.70% 1302
chr3 1393113 0.70% 1089
chr4 981595 0.52% 759
chr5 1148108 0.63% 848
chr6 1405872 0.82% 1093
chr7 1176075 0.74% 965
chr8 887382 0.61% 698
chr9 980638 0.71% 800
chr10 1029376 0.77% 794
chr11 1313679 0.97% 1048
chr12 1307465 0.98% 1028
chr13 494187 0.43% 407
chr14 789501 0.74% 608
chr15 779410 0.76% 638
chr16 923888 1.02% 774
chr17 1361391 1.64% 1110
chr18 426255 0.53% 338
chr19 1525526 2.60% 1326
chr20 582529 0.90% 476
chr21 237456 0.51% 202
chr22 493966 0.97% 447
chrM 15043 90.79% 5
chrX 648104 0.42% 644
chrY 387 <0.01% 1
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 19290 230 8963 1242.65 1107
global segment-length histogram

Files

Filename Size md5
ENCFF353QWL.bed.gz 492.99 KB 77cd35415cd02353950c80c74e5435de
ENCFF353QWL.tabix.bed.gz 218.45 KB 0eb7cef4c5c9140de90b62bc85f5dd07
ENCFF353QWL.tabix.bed.gz.tbi 128.2 KB 6fb29adcfed6d3abc37724df637b0362
genomic_resource.yaml 1.51 KB ac010606c41e1b583024046375f1b1a7
statistics/