Resource
| Id | Histone_ChIP-seq/ENCSR006ANF |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR006ANF [biosample_summary="Homo sapiens BLaER1 12 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"] |
| Description |
status: released biological_replicates: Rep 1 summary: 12 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR006ANF | float |
Histone_ChIP-seq_ENCSR006ANF |
Histone_ChIP-seq ENCSR006ANF [biosample_summary="Homo sapiens BLaER1 12 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"]
|
 |
[1.17, 74.4] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 124911215 | 3.88% | 106122 |
| chr1 | 11774177 | 4.73% | 9985 |
| chr1_KI270706v1_random | 377 | 0.22% | 1 |
| chr1_KI270713v1_random | 2022 | 4.96% | 4 |
| chr2 | 9101457 | 3.76% | 7957 |
| chr3 | 6673682 | 3.37% | 5875 |
| chr3_GL000221v1_random | 507 | 0.33% | 1 |
| chr4 | 4539757 | 2.39% | 4122 |
| chr5 | 6390987 | 3.52% | 5339 |
| chr6 | 6480065 | 3.79% | 5497 |
| chr7 | 6094475 | 3.82% | 5423 |
| chr8 | 5461917 | 3.76% | 4782 |
| chr9 | 5251515 | 3.79% | 4535 |
| chr9_KI270718v1_random | 837 | 2.20% | 2 |
| chr9_KI270719v1_random | 328 | 0.19% | 1 |
| chr10 | 6037937 | 4.51% | 5214 |
| chr11 | 5847444 | 4.33% | 4936 |
| chr11_KI270721v1_random | 1076 | 1.07% | 3 |
| chr12 | 6175993 | 4.63% | 5049 |
| chr13 | 2836965 | 2.48% | 2507 |
| chr14 | 4145446 | 3.87% | 3435 |
| chr14_GL000009v2_random | 421 | 0.21% | 1 |
| chr14_GL000194v1_random | 1208 | 0.63% | 2 |
| chr14_GL000225v1_random | 473 | 0.22% | 1 |
| chr14_KI270723v1_random | 893 | 2.34% | 1 |
| chr15 | 3919925 | 3.84% | 3421 |
| chr15_KI270727v1_random | 734 | 0.16% | 2 |
| chr16 | 5672183 | 6.28% | 4725 |
| chr16_KI270728v1_random | 1840 | 0.10% | 3 |
| chr17 | 7306552 | 8.78% | 5766 |
| chr17_GL000205v2_random | 12374 | 6.67% | 8 |
| chr18 | 2490250 | 3.10% | 2178 |
| chr19 | 6414780 | 10.94% | 4986 |
| chr20 | 4145811 | 6.43% | 3534 |
| chr21 | 1741277 | 3.73% | 1479 |
| chr22 | 3424180 | 6.74% | 2827 |
| chr22_KI270731v1_random | 1175 | 0.78% | 3 |
| chr22_KI270733v1_random | 2110 | 1.17% | 5 |
| chrUn_GL000195v1 | 2817 | 1.54% | 5 |
| chrUn_GL000216v2 | 694 | 0.39% | 2 |
| chrUn_GL000219v1 | 4344 | 2.42% | 4 |
| chrUn_GL000220v1 | 268 | 0.17% | 1 |
| chrUn_GL000224v1 | 1473 | 0.82% | 2 |
| chrUn_KI270303v1 | 434 | 22.35% | 1 |
| chrUn_KI270304v1 | 256 | 11.82% | 1 |
| chrUn_KI270310v1 | 330 | 27.48% | 1 |
| chrUn_KI270411v1 | 2047 | 77.36% | 2 |
| chrUn_KI270412v1 | 348 | 29.52% | 1 |
| chrUn_KI270422v1 | 443 | 30.66% | 1 |
| chrUn_KI270438v1 | 2376 | 2.11% | 4 |
| chrUn_KI270465v1 | 450 | 25.37% | 1 |
| chrUn_KI270512v1 | 250 | 1.10% | 1 |
| chrUn_KI270519v1 | 1286 | 0.93% | 2 |
| chrUn_KI270544v1 | 1006 | 83.69% | 2 |
| chrUn_KI270742v1 | 489 | 0.26% | 1 |
| chrUn_KI270744v1 | 5341 | 3.17% | 4 |
| chrUn_KI270753v1 | 3796 | 6.03% | 3 |
| chrX | 2928349 | 1.88% | 2471 |
| chrY | 1268 | <0.01% | 2 |
| 3308 contigs with no values (123325857 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 106122 | 250 | 39660 | 1177.05 | 573 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF314FVV.bed.gz | 2.38 MB | 20fca75ed4a77c0c97307a5adff21515 |
| ENCFF314FVV.tabix.bed.gz | 1.09 MB | 94f5b295c591e7f0f1523d57d80fad09 |
| ENCFF314FVV.tabix.bed.gz.tbi | 274.14 KB | 477e84ec33e38e340742cb552faaf866 |
| genomic_resource.yaml | 3.12 KB | d90f523b8ca3012201f0a83ca3348505 |
| statistics/ |