Resource

Id Histone_ChIP-seq/ENCSR005UXZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR005UXZ [biosample_summary="Homo sapiens Peyer''s patch tissue female adult (53 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR005UXZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001211/
  • biosample_summary: Homo sapiens Peyer's patch tissue female adult (53 years)
  • date_created: 2016-10-19T23:05:24.954448+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR005UXZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR005UXZ float

Histone_ChIP-seq_ENCSR005UXZ
Histone_ChIP-seq ENCSR005UXZ [biosample_summary="Homo sapiens Peyer''s patch tissue female adult (53 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR005UXZ [1.17, 13]
n
568,611
mean
3.28
sd
0.752

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 5686110.02% 910
chr1 24382 0.01% 44
chr2 13389 0.01% 26
chr3 19065 0.01% 36
chr4 38236 0.02% 63
chr5 21741 0.01% 46
chr6 7519 <0.01% 16
chr7 21191 0.01% 37
chr8 15980 0.01% 23
chr9 14816 0.01% 27
chr10 14007 0.01% 24
chr11 14083 0.01% 25
chr12 30276 0.02% 48
chr13 3164 <0.01% 8
chr14 4153 <0.01% 10
chr15 9966 0.01% 16
chr16 24043 0.03% 37
chr17 6534 0.01% 11
chr18 3781 <0.01% 7
chr19 242915 0.41% 331
chr20 3751 0.01% 8
chr21 24128 0.05% 41
chr22 1120 <0.01% 2
chrX 5565 <0.01% 14
chrY 4806 0.01% 10
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 910 220 4046 624.85 519
global segment-length histogram

Files

Filename Size md5
ENCFF703GFV.bed.gz 19.47 KB 73185d31249e64c7a4c675017a153783
ENCFF703GFV.tabix.bed.gz 9.81 KB e87b0062b247d05a27bbbe968eceda94
ENCFF703GFV.tabix.bed.gz.tbi 11.14 KB 353b3e8fece9fb1b9c3243f07097d755
genomic_resource.yaml 1.52 KB 5c9bbdd5056156a347a20f931ce1cf33
statistics/