type: position_score table: filename: ENCFF158YTR.tabix.bed.gz header_mode: none zero_based: true format: tabix chrom: column_index: 0 pos_begin: column_index: 1 pos_end: column_index: 2 scores: - id: Histone_ChIP-seq_ENCSR000FCP column_index: 3 type: float desc: signal histogram: type: number number_of_bins: 100 meta: summary: 'ChIP-seq ENCSR000FCP [TISSUE: Homo sapiens HCT116, TARGET: H3K9me3]' description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\ \n**summary**: \n\n**output\\_type**: pseudoreplicated peaks\n\n**audit\\_internal\\\ _action**: Released analysis {ENCAN829DUI|/analyses/ENCAN829DUI/} has in progress\ \ subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/}\n\ \n**audit\\_internal\\_action**: Released analysis {ENCAN829DUI|/analyses/ENCAN829DUI/}\ \ has in progress subobject document {74cb5647-23f1-4e2d-924b-0f9f92f1a038|/documents/74cb5647-23f1-4e2d-924b-0f9f92f1a038/}\n\ \n**audit\\_warning**: Processed unfiltered alignments file {ENCFF383RZK|/files/ENCFF383RZK/}\ \ processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 37291408 mapped reads.\ \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\ \ H3K9me3-human and investigated as a broad histone mark is 35 million mapped\ \ reads. The recommended value is > 45 million, but > 35 million is acceptable.\ \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})\n\n**audit\\\ _warning**: Processed unfiltered alignments file {ENCFF027DUB|/files/ENCFF027DUB/}\ \ processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 36320111 mapped reads.\ \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\ \ H3K9me3-human and investigated as a broad histone mark is 35 million mapped\ \ reads. The recommended value is > 45 million, but > 35 million is acceptable.\ \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})" labels: reference_genome: hg38/genomes/GRCh38-hg38 accession: ENCSR000FCP status: released assay_term_name: ChIP-seq simple_biosample_summary: '' biosample_summary: Homo sapiens HCT116 replication_type: isogenic biosample_ontology: /biosample-types/cell_line_EFO_0002824/ perturbed: false doi: 10.17989/ENCSR000FCP date_created: '2013-10-29T20:05:28.600209+00:00' date_released: '2014-07-07' submitter_comment: Cross-correlation metrics are too poor to permit further analysis. target: H3K9me3