type: position_score
table:
  filename: ENCFF498VVY.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR000FCK
  column_index: 3
  type: float
  desc: 'Histone_ChIP-seq ENCSR000FCK [biosample_summary="Homo sapiens HEK293" and target="H3K36me3"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'Histone_ChIP-seq ENCSR000FCK [biosample_summary="Homo sapiens HEK293" and target="H3K36me3"]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 2\n\n**summary**:\
    \ \n\n**output\\_type**: pseudoreplicated peaks\n\n**audit\\_internal\\_action**:\
    \ Archived analysis {ENCAN538ZHM|/analyses/ENCAN538ZHM/} has deleted subobject\
    \ file {ENCFF816VSK|/files/ENCFF816VSK/}\n\n**audit\\_internal\\_action**: Archived\
    \ analysis {ENCAN538ZHM|/analyses/ENCAN538ZHM/} has in progress subobject quality\
    \ standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/}\n\n\
    **audit\\_internal\\_action**: Archived analysis {ENCAN538ZHM|/analyses/ENCAN538ZHM/}\
    \ has deleted subobject file {ENCFF385LDM|/files/ENCFF385LDM/}\n\n**audit\\_not\\\
    _compliant**: Processed alignments file {ENCFF894ZZY|/files/ENCFF894ZZY/} processed\
    \ by ChIP-seq ENCODE3 hg19 pipeline has 10844630 usable fragments. The minimum\
    \ ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human\
    \ and investigated as a broad histone mark is 20 million usable fragments. The\
    \ recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE\
    \ ChIP-seq data standards|/data-standards/chip-seq/})\n\n**audit\\_not\\_compliant**:\
    \ Processed alignments file {ENCFF539DTI|/files/ENCFF539DTI/} processed by ChIP-seq\
    \ ENCODE3 hg19 pipeline has 22172437 usable fragments. The minimum ENCODE standard\
    \ for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated\
    \ as a broad histone mark is 20 million usable fragments. The recommended value\
    \ is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data\
    \ standards|/data-standards/chip-seq/})"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR000FCK
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens HEK293
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0001182/
    perturbed: false
    doi: 10.17989/ENCSR000FCK
    date_created: '2013-10-29T20:05:23.695285+00:00'
    date_released: '2014-07-07'
    submitter_comment: Cross-correlation metrics are too poor to permit further analysis.
    target: H3K36me3