Resource

Id Histone_ChIP-seq/ENCSR000EVZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000EVZ [biosample_summary="Homo sapiens K562" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR000EVZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002067/
  • biosample_summary: Homo sapiens K562
  • date_created: 2014-02-12T22:51:16.348859+00:00
  • date_released: 2011-05-19
  • doi: 10.17989/ENCSR000EVZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000EVZ float

Histone_ChIP-seq_ENCSR000EVZ

Histone_ChIP-seq ENCSR000EVZ [biosample_summary="Homo sapiens K562" and target="H3K9ac"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR000EVZ [1.65, 71.9]
n
65,372,333
mean
11.2
sd
10.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 653723332.03% 135749
chr1 7373643 2.96% 15512
chr2 3621858 1.50% 8004
chr3 3191519 1.61% 6774
chr4 1540225 0.81% 3127
chr5 2337593 1.29% 4935
chr6 3298805 1.93% 6932
chr7 3457318 2.17% 7618
chr8 2136489 1.47% 4463
chr9 3151855 2.28% 6478
chr10 2496198 1.87% 5348
chr11 4214541 3.12% 8452
chr12 2943960 2.21% 6106
chr13 575852 0.50% 1203
chr14 1563162 1.46% 3252
chr15 1908723 1.87% 4167
chr16 3971738 4.40% 7991
chr17 4751060 5.71% 9617
chr18 562335 0.70% 1254
chr19 5797049 9.89% 11032
chr20 2080063 3.23% 4603
chr21 825724 1.77% 1953
chr22 2388158 4.70% 4772
chrX 1183833 0.76% 2154
chrY 632 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 135749 155 13521 481.57 313
global segment-length histogram

Files

Filename Size md5
ENCFF085JHT.bed.gz 2.97 MB 5b5a4a7be89d9cb361338ca4d67a5806
ENCFF085JHT.tabix.bed.gz 1.35 MB 1934d7892dc47fa71cec5228b826bf10
ENCFF085JHT.tabix.bed.gz.tbi 257.03 KB 22d35ea5249180b5a4ed6b50554e364a
genomic_resource.yaml 1.85 KB 96c0a6fa373c8b1454cbee2ca48c36ba
statistics/