Resource

Id Histone_ChIP-seq/ENCSR000EUTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000EUT [biosample_summary="Homo sapiens HCT116" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR000EUT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002824/
  • biosample_summary: Homo sapiens HCT116
  • date_created: 2013-12-19T23:51:12.183870+00:00
  • date_released: 2012-06-15
  • doi: 10.17989/ENCSR000EUT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000EUT float

Histone_ChIP-seq_ENCSR000EUT
Histone_ChIP-seq ENCSR000EUT [biosample_summary="Homo sapiens HCT116" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR000EUT [1.65, 88]
n
55,860,697
mean
19.4
sd
14.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 558606971.74% 38273
chr1 5244221 2.11% 3734
chr2 3647993 1.51% 2499
chr3 2943302 1.48% 2004
chr4 2675842 1.41% 1486
chr5 2159073 1.19% 1526
chr6 3121641 1.83% 2057
chr7 2754675 1.73% 1920
chr8 2289922 1.58% 1496
chr9 2198428 1.59% 1598
chr10 2694788 2.01% 1695
chr11 2889625 2.14% 1971
chr12 3556412 2.67% 2085
chr13 924123 0.81% 657
chr14 1797352 1.68% 1249
chr15 1445056 1.42% 1111
chr16 2360620 2.61% 1747
chr17 3758748 4.51% 2579
chr18 823511 1.02% 591
chr19 3668100 6.26% 2703
chr20 1596185 2.48% 1141
chr21 472652 1.01% 358
chr22 1513036 2.98% 1091
chrX 1325392 0.85% 975
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 38273 223 134300 1459.53 986
global segment-length histogram

Files

Filename Size md5
ENCFF853VVI.bed.gz 1.0 MB 4070ce453b98442d67955779a2e240f2
ENCFF853VVI.tabix.bed.gz 436.22 KB 55157b5628681c7d3834200cf31fb2cc
ENCFF853VVI.tabix.bed.gz.tbi 164.53 KB 7dccc412ca2c6f844bd8c37b51f3b96a
genomic_resource.yaml 2.09 KB 81b9d1f42a4017c531e7b7863ad95571
statistics/