type: position_score
table:
  filename: ENCFF469OXD.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR000DUA
  column_index: 3
  type: float
  desc: signal
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'ChIP-seq ENCSR000DUA [TISSUE: Homo sapiens HeLa-S3 G1b phase, TARGET:
    H3K4me3]'
  description: '**status**: released


    **biological\_replicates**: Rep 1, Rep 2


    **summary**: G1b phase


    **output\_type**: replicated peaks


    **audit\_internal\_action**: Released analysis {ENCAN814YZN|/analyses/ENCAN814YZN/}
    has in progress subobject document {a6216f23-9635-413b-b9d0-0b35739abb65|/documents/a6216f23-9635-413b-b9d0-0b35739abb65/}


    **audit\_internal\_action**: Released analysis {ENCAN814YZN|/analyses/ENCAN814YZN/}
    has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/}


    **audit\_warning**: Processed alignments file {ENCFF470WRZ|/files/ENCFF470WRZ/}
    processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 13216300 usable fragments.
    The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments.
    The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/})


    **audit\_warning**: Processed alignments file {ENCFF847DCI|/files/ENCFF847DCI/}
    processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 10771722 usable fragments.
    The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments.
    The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/})'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR000DUA
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: G1b phase
    biosample_summary: Homo sapiens HeLa-S3 G1b phase
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0002791/
    perturbed: false
    doi: 10.17989/ENCSR000DUA
    date_created: '2013-12-12T06:57:41.411678+00:00'
    date_released: '2011-02-11'
    submitter_comment: Replicate 1,1 of this experiment was previously attributed
      to biosample ENCBS432ENC and replicate 2,1 of this experiment was previously
      attributed to biosample ENCBS432ENC but they have since been corrected to the
      current biosamples. Please note that the biosample term has remain unchanged.
    target: H3K4me3