Resource

Id Histone_ChIP-seq/ENCSR000DSScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000DSS [biosample_summary="Homo sapiens H7" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR000DSS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005904/
  • biosample_summary: Homo sapiens H7
  • date_created: 2013-12-12T06:57:17.825154+00:00
  • date_released: 2011-02-11
  • doi: 10.17989/ENCSR000DSS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment: Replicate 1,1 of this experiment was previously attributed to biosample ENCBS293AAA and replicate 2,1 of this experiment was previously attributed to biosample ENCBS293AAA but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000DSS float

Histone_ChIP-seq_ENCSR000DSS

Histone_ChIP-seq ENCSR000DSS [biosample_summary="Homo sapiens H7" and target="H3K36me3"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR000DSS [2.08, 23]
n
26,679,192
mean
4.88
sd
1.61

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 266791920.83% 128599
chr1 2907605 1.17% 13648
chr2 1618782 0.67% 8282
chr3 1498626 0.76% 7395
chr4 770104 0.40% 4158
chr5 1262602 0.70% 6376
chr6 1129807 0.66% 5697
chr7 1180144 0.74% 5848
chr8 746139 0.51% 3952
chr9 1140864 0.82% 5464
chr10 979354 0.73% 4960
chr11 1415257 1.05% 6620
chr12 1648537 1.24% 7635
chr13 348777 0.30% 2031
chr14 796425 0.74% 4003
chr15 884697 0.87% 4342
chr16 1382469 1.53% 6266
chr17 1771112 2.13% 7997
chr18 303807 0.38% 1705
chr19 2046509 3.49% 8896
chr20 988700 1.53% 4411
chr21 330656 0.71% 1575
chr22 888431 1.75% 3972
chrX 639390 0.41% 3364
chrY 398 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 128599 75 3895 207.46 155
global segment-length histogram

Files

Filename Size md5
ENCFF488DRS.bed.gz 2.08 MB 3ac57f4dc65320cfc4919b2067a6c690
ENCFF488DRS.tabix.bed.gz 1.12 MB d98d694bc1fd1b85c0f8ad962a604d22
ENCFF488DRS.tabix.bed.gz.tbi 167.17 KB 5cfe2972840657cba21fe92501627d3a
genomic_resource.yaml 2.66 KB 7172970e0c19acdf35e88d7a70a693b0
statistics/