type: position_score
table:
  filename: ENCFF479TQU.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR000DQK
  column_index: 3
  type: float
  desc: 'Histone_ChIP-seq ENCSR000DQK [biosample_summary="Homo sapiens Caco-2" and target="H3K36me3"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'Histone_ChIP-seq ENCSR000DQK [biosample_summary="Homo sapiens Caco-2" and target="H3K36me3"]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\
    \n**summary**: \n\n**output\\_type**: pseudoreplicated peaks\n\n**audit\\_internal\\\
    _action**: Released analysis {ENCAN869USG|/analyses/ENCAN869USG/} has in progress\
    \ subobject document {6cd25096-02e2-43be-aafa-4869d30fbc99|/documents/6cd25096-02e2-43be-aafa-4869d30fbc99/}\n\
    \n**audit\\_internal\\_action**: Released analysis {ENCAN869USG|/analyses/ENCAN869USG/}\
    \ has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/}\n\
    \n**audit\\_not\\_compliant**: Processed alignments file {ENCFF788XRD|/files/ENCFF788XRD/}\
    \ processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 11686535 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K36me3-human and investigated as a broad histone mark is 20 million usable\
    \ fragments. The recommended value is > 45 million, but > 35 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})\n\n**audit\\\
    _not\\_compliant**: Processed alignments file {ENCFF691XDC|/files/ENCFF691XDC/}\
    \ processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 11573700 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K36me3-human and investigated as a broad histone mark is 20 million usable\
    \ fragments. The recommended value is > 45 million, but > 35 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR000DQK
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens Caco-2
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0001099/
    perturbed: false
    doi: 10.17989/ENCSR000DQK
    date_created: '2014-02-12T23:07:14.856626+00:00'
    date_released: '2011-02-11'
    submitter_comment: Replicate 2,1 of this experiment was previously attributed
      to biosample ENCBS391ENC and replicate 1,1 of this experiment was previously
      attributed to biosample ENCBS391ENC but they have since been corrected to the
      current biosamples. Please note that the biosample term has remain unchanged.
    target: H3K36me3