Resource

Id Histone_ChIP-seq/ENCSR000DPKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000DPK [biosample_summary="Homo sapiens AG04450" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR000DPK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0006270/
  • biosample_summary: Homo sapiens AG04450
  • date_created: 2014-02-12T23:10:33.497553+00:00
  • date_released: 2012-07-24
  • doi: 10.17989/ENCSR000DPK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000DPK float

Histone_ChIP-seq_ENCSR000DPK

Histone_ChIP-seq ENCSR000DPK [biosample_summary="Homo sapiens AG04450" and target="H3K27me3"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR000DPK [2.1, 27.8]
n
51,971,438
mean
5.91
sd
2.54

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 519714381.62% 107410
chr1 5398264 2.17% 10890
chr2 4247602 1.75% 8822
chr3 3194650 1.61% 6933
chr4 1947971 1.02% 4101
chr5 2428886 1.34% 5136
chr6 2498148 1.46% 5245
chr7 2106716 1.32% 4203
chr8 2097807 1.45% 4528
chr9 2689973 1.94% 5278
chr10 2885783 2.16% 6035
chr11 3693505 2.73% 7635
chr12 2085827 1.57% 4260
chr13 1209841 1.06% 2583
chr14 1625333 1.52% 3332
chr15 2244321 2.20% 4660
chr16 1681092 1.86% 3566
chr17 3071480 3.69% 5862
chr18 1084167 1.35% 2401
chr19 1356444 2.31% 2739
chr20 1986955 3.08% 4047
chr21 732026 1.57% 1504
chr22 1432598 2.82% 2950
chrX 267089 0.17% 685
chrY 4960 0.01% 15
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 107410 160 12630 483.86 357
global segment-length histogram

Files

Filename Size md5
ENCFF314QBW.bed.gz 1.71 MB 5e0afbfb91a7372f2d82430923ebbf17
ENCFF314QBW.tabix.bed.gz 931.3 KB b05c2f6675c33b1d3a2a2eaf19e90881
ENCFF314QBW.tabix.bed.gz.tbi 213.2 KB f8c7ce67def6dbebd1ec48155baf772a
genomic_resource.yaml 1.88 KB d07cf79def7caaedf6d1243546f12cf5
statistics/