Resource
| Id | Histone_ChIP-seq/ENCSR000AQN |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR000AQN [biosample_summary="Homo sapiens HeLa-S3" and target="H2AFZ"] |
| Description |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN146HOD|/analyses/ENCAN146HOD/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AQN | float |
Histone_ChIP-seq_ENCSR000AQN |
Histone_ChIP-seq ENCSR000AQN [biosample_summary="Homo sapiens HeLa-S3" and target="H2AFZ"]
|
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[1.65, 36] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 41137640 | 1.28% | 72743 |
| chr1 | 4259198 | 1.71% | 7363 |
| chr1_KI270712v1_random | 426 | 0.24% | 1 |
| chr2 | 2808620 | 1.16% | 4984 |
| chr3 | 2586147 | 1.30% | 4569 |
| chr4 | 1240466 | 0.65% | 2283 |
| chr5 | 2537460 | 1.40% | 4714 |
| chr6 | 2427970 | 1.42% | 4325 |
| chr7 | 1945240 | 1.22% | 3564 |
| chr8 | 1785209 | 1.23% | 3244 |
| chr9 | 2024831 | 1.46% | 3526 |
| chr9_KI270720v1_random | 294 | 0.75% | 1 |
| chr10 | 1831473 | 1.37% | 3273 |
| chr11 | 2201802 | 1.63% | 3723 |
| chr12 | 2247919 | 1.69% | 3943 |
| chr13 | 805753 | 0.70% | 1532 |
| chr14 | 1377915 | 1.29% | 2356 |
| chr14_GL000009v2_random | 191 | 0.09% | 1 |
| chr15 | 1683776 | 1.65% | 2873 |
| chr16 | 1433388 | 1.59% | 2438 |
| chr17 | 2054704 | 2.47% | 3449 |
| chr17_GL000205v2_random | 914 | 0.49% | 2 |
| chr18 | 857847 | 1.07% | 1645 |
| chr19 | 1611380 | 2.75% | 2805 |
| chr20 | 1191423 | 1.85% | 2147 |
| chr21 | 459818 | 0.98% | 836 |
| chr22 | 589708 | 1.16% | 1050 |
| chrUn_GL000195v1 | 336 | 0.18% | 1 |
| chrUn_GL000220v1 | 271 | 0.17% | 1 |
| chrUn_KI270442v1 | 592 | 0.15% | 2 |
| chrX | 1172569 | 0.75% | 2092 |
| 3336 contigs with no values (184965348 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 72743 | 160 | 4548 | 565.52 | 444 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF470FSZ.bed.gz | 1.6 MB | be1573363b1967882482a96c5f40f54f |
| ENCFF470FSZ.tabix.bed.gz | 751.34 KB | 6698d222e9dd31d6c1921358f5ba332d |
| ENCFF470FSZ.tabix.bed.gz.tbi | 299.5 KB | 5ed140269613597a1ce2434f104ba2ff |
| genomic_resource.yaml | 1.36 KB | d520e346a2cb9213642aec795ff62c15 |
| statistics/ |
