type: position_score
table:
  filename: ENCFF894VEM.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR000APE
  column_index: 3
  type: float
  desc: 'Histone_ChIP-seq ENCSR000APE [biosample_summary="Homo sapiens K562" and target="H3K9me3"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'Histone_ChIP-seq ENCSR000APE [biosample_summary="Homo sapiens K562" and target="H3K9me3"]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\
    \n**summary**: \n\n**output\\_type**: replicated peaks\n\n**audit\\_internal\\\
    _action**: Archived analysis {ENCAN130LOX|/analyses/ENCAN130LOX/} has in progress\
    \ subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/}\n\
    \n**audit\\_not\\_compliant**: Processed unfiltered alignments file {ENCFF159LBN|/files/ENCFF159LBN/}\
    \ processed by ChIP-seq ENCODE3 hg19 pipeline has 18912253 mapped reads. The minimum\
    \ ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human\
    \ and investigated as a broad histone mark is 35 million mapped reads. The recommended\
    \ value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq\
    \ data standards|/data-standards/chip-seq/})\n\n**audit\\_warning**: Processed\
    \ unfiltered alignments file {ENCFF516VWS|/files/ENCFF516VWS/} processed by ChIP-seq\
    \ ENCODE3 hg19 pipeline has 40887276 mapped reads. The minimum ENCODE standard\
    \ for each replicate in a ChIP-seq experiment targeting H3K9me3-human and investigated\
    \ as a broad histone mark is 35 million mapped reads. The recommended value is\
    \ > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR000APE
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens K562
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0002067/
    perturbed: false
    doi: 10.17989/ENCSR000APE
    date_created: '2013-11-07T22:16:19.545001+00:00'
    date_released: '2011-02-10'
    submitter_comment: ''
    target: H3K9me3